Click here to switch to the map view.

The map label for this gene is dspA [H]

Identifier: 86609856

GI number: 86609856

Start: 2517517

End: 2519619

Strand: Direct

Name: dspA [H]

Synonym: CYB_2421

Alternate gene names: 86609856

Gene position: 2517517-2519619 (Clockwise)

Preceding gene: 86609854

Following gene: 86609857

Centisome position: 82.63

GC content: 59.87

Gene sequence:

>2103_bases
ATGCCTCCTGTCAGCACTGTCGAGCCAGCCGAGCCCATTGCCGAAGTCCAATCTCCTGAGCTGGCTTCTTCTCCTGCCGA
GCCATTGCCTGGCGCTGTGGACATGTCAGTGCCAACAACGACCGGGATCTCTATGGGATCCCTGCGGCGCTGGTGGGCGC
GCTGGAAACAAAAGCTGCGCCTGGAGACCCAGCTGCTCTTTGTGGCCACGCTGGTGGTCTCCTTGGTGGTGAGCAGTTTC
ACCTTCTGGGCCGTCAGCACCGTGCAGCAGGATGCTCGCTTCAACGAAGCCCGCTTTGGCCGAGATCTGGGGCTGCTCTT
GGCCGCCAATGTCGCCCCCCTGATTGCGGAAGATCGCATTGGCGAAGTAGCGCAACTGTCCCGCCAGTACTTTGAGAGCA
CCAGCAGCATCCGCTATTTGCTCTACGCCGATCCCGAAGGAAACATCTACTACGGGATCCCGTTCTCCAATCAGGAGGTG
AAAACCTCCCTCAGCCTTACCCGTCGCATGCAACTGCCGGACAATCGCCCCCCTGCTGAGGGCCAACCGCTGGTGCGCAC
CCACCTCACTCCTGCCGGGCGGGTGACGGATATTTTCGTCGGCATCTACCATCAGGGCCGCTTTTTGGGCACCCTCGGCT
TGGGCATCAATCCCAATCCCGCCCTGGTGCGCTCCACCCAGCTGGCGCGGGAGGTCTCGATTGGGGTGTTTTTGGCGGTG
TGGGTCTTGGCCATCCTGGGAGCGGTGGTCAATGCCCTCACCATCACCTATCCCATCAAAGAGCTGGTCAAAGGTGTCCA
GGAGATCACCAAAGGTAACTTCAAGCAGCGCATCGACCTGCCCTTCGGGGGAGAGCTGGCCCAGCTCATCGACAGCTTTA
ACGAGATGGCGGAGCGGCTGCAAAGCTACGAAGAGCAAAACATCGAGGAACTGGCTGCAGCCAAAGCCAAGTTGGAGACC
TTGGTCTTCTCCATCGTCGATGCTGCCATTTTGCTGGATGCCGAGTTGCGGGTGCTGCTGCTCAACCCTGCCGCCTCCCG
CATGTTTGGCTGGGAAGGGGATCCCGTTTTGGGCAAACCCCTGCCGGAGCTGTTGCCGGAGGATCTGCAGCAGCAACTGG
CCCGCCCCCTGATGCAAATTGCCCGCGGGGATCAAGAGGCAGAGGAAGTTCGCGTCAACCTCACCGGCCCTACCAAGCGC
GTCATTCGCATTCTGCTTTCACCGGTGTCGGATCCGCGGCGGCAAAATCTCAAGGGGATCGTGATGACGGTGCAGGACAT
CACCCGCGAGGTGGAGCTCAACGAAGCCAAGGCTCAATTCATCAGCAACATCAGCCACGAGCTGCGCACCCCCCTCTTCA
GCATCAAGTCTTTTATCGAGACCCTCTACGAGTACGGCGAGCAGATGTCCTCGGCGGAGCGGCTGGACTACCTGGAAATT
GCCAACCGCGAAACCGATCGCCTCACCCGCCTGGTCAACGATGTTTTGGATTTGTCTCGTCTGGAATCGGGCAAGCAGTA
CCACTTTGAAGGTGTCGACATCGCGGCAGTGATCGAGCAGACTTTGCGCACCCACCAACTGCAGGCCCGCGACAAAGGGA
TCCAGCTGCGCAAATTCGTTGATCCCGATCTGCCTTTGGTGTGGGGCAACTACGATCTGCTCTTGCAGGTGATGACCAAT
CTCCTGGGCAATGCCCTCAAGTTCACTCCCTCAGGGGGCCTGGTGACGGTACATGCCCACCTGGTGGTTCAGGCGGATGG
ATCCCCGCAGGCAGTGCGGGTGGCGGTGGCCGATACAGGCATTGGCATTGCCCCAGAAGATCAGGAGCGGATTTTCGACC
GCTTTTTCCGTGTCGAGAACCGGGTCCACACCCTAGAGGGCACCGGCCTGGGGTTGGCCATCGTGCGCAACATCCTGGAG
AAACATCGAACCCGCATCTGCCTGGAGAGCAAGCTAGAACAGGGATCCACCTTCTGGTTCGACCTGCACCTGTACACTGA
AGAGGGACCGCTGGAGTTCGAGGTTCAGCCAGCCGAGACGGATCCCCCCAGTTGCTGCTGGCGGGAGCATGCCTCTAACC
CCCAAAACCCTGAACTTTGCTGA

Upstream 100 bases:

>100_bases
CACCCGGCCTTGGCTGAGACAAAGGGATCGCCTGCCCATGTCAGAATGGTGGCGAATCACCGCCCTATATCCGTTCACGC
TATCTGTTCACGTTGGGTTC

Downstream 100 bases:

>100_bases
ATTTACTGAGCTTTAGGCGGTTTGGCAAAAGTCATTGAGAGGGATATAGTAGACCAAGTTTCCCCCTGATCCTTGAGTCC
ACCGCAACGGTTGCCGGGAA

Product: sensory box histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 700; Mature: 699

Protein sequence:

>700_residues
MPPVSTVEPAEPIAEVQSPELASSPAEPLPGAVDMSVPTTTGISMGSLRRWWARWKQKLRLETQLLFVATLVVSLVVSSF
TFWAVSTVQQDARFNEARFGRDLGLLLAANVAPLIAEDRIGEVAQLSRQYFESTSSIRYLLYADPEGNIYYGIPFSNQEV
KTSLSLTRRMQLPDNRPPAEGQPLVRTHLTPAGRVTDIFVGIYHQGRFLGTLGLGINPNPALVRSTQLAREVSIGVFLAV
WVLAILGAVVNALTITYPIKELVKGVQEITKGNFKQRIDLPFGGELAQLIDSFNEMAERLQSYEEQNIEELAAAKAKLET
LVFSIVDAAILLDAELRVLLLNPAASRMFGWEGDPVLGKPLPELLPEDLQQQLARPLMQIARGDQEAEEVRVNLTGPTKR
VIRILLSPVSDPRRQNLKGIVMTVQDITREVELNEAKAQFISNISHELRTPLFSIKSFIETLYEYGEQMSSAERLDYLEI
ANRETDRLTRLVNDVLDLSRLESGKQYHFEGVDIAAVIEQTLRTHQLQARDKGIQLRKFVDPDLPLVWGNYDLLLQVMTN
LLGNALKFTPSGGLVTVHAHLVVQADGSPQAVRVAVADTGIGIAPEDQERIFDRFFRVENRVHTLEGTGLGLAIVRNILE
KHRTRICLESKLEQGSTFWFDLHLYTEEGPLEFEVQPAETDPPSCCWREHASNPQNPELC

Sequences:

>Translated_700_residues
MPPVSTVEPAEPIAEVQSPELASSPAEPLPGAVDMSVPTTTGISMGSLRRWWARWKQKLRLETQLLFVATLVVSLVVSSF
TFWAVSTVQQDARFNEARFGRDLGLLLAANVAPLIAEDRIGEVAQLSRQYFESTSSIRYLLYADPEGNIYYGIPFSNQEV
KTSLSLTRRMQLPDNRPPAEGQPLVRTHLTPAGRVTDIFVGIYHQGRFLGTLGLGINPNPALVRSTQLAREVSIGVFLAV
WVLAILGAVVNALTITYPIKELVKGVQEITKGNFKQRIDLPFGGELAQLIDSFNEMAERLQSYEEQNIEELAAAKAKLET
LVFSIVDAAILLDAELRVLLLNPAASRMFGWEGDPVLGKPLPELLPEDLQQQLARPLMQIARGDQEAEEVRVNLTGPTKR
VIRILLSPVSDPRRQNLKGIVMTVQDITREVELNEAKAQFISNISHELRTPLFSIKSFIETLYEYGEQMSSAERLDYLEI
ANRETDRLTRLVNDVLDLSRLESGKQYHFEGVDIAAVIEQTLRTHQLQARDKGIQLRKFVDPDLPLVWGNYDLLLQVMTN
LLGNALKFTPSGGLVTVHAHLVVQADGSPQAVRVAVADTGIGIAPEDQERIFDRFFRVENRVHTLEGTGLGLAIVRNILE
KHRTRICLESKLEQGSTFWFDLHLYTEEGPLEFEVQPAETDPPSCCWREHASNPQNPELC
>Mature_699_residues
PPVSTVEPAEPIAEVQSPELASSPAEPLPGAVDMSVPTTTGISMGSLRRWWARWKQKLRLETQLLFVATLVVSLVVSSFT
FWAVSTVQQDARFNEARFGRDLGLLLAANVAPLIAEDRIGEVAQLSRQYFESTSSIRYLLYADPEGNIYYGIPFSNQEVK
TSLSLTRRMQLPDNRPPAEGQPLVRTHLTPAGRVTDIFVGIYHQGRFLGTLGLGINPNPALVRSTQLAREVSIGVFLAVW
VLAILGAVVNALTITYPIKELVKGVQEITKGNFKQRIDLPFGGELAQLIDSFNEMAERLQSYEEQNIEELAAAKAKLETL
VFSIVDAAILLDAELRVLLLNPAASRMFGWEGDPVLGKPLPELLPEDLQQQLARPLMQIARGDQEAEEVRVNLTGPTKRV
IRILLSPVSDPRRQNLKGIVMTVQDITREVELNEAKAQFISNISHELRTPLFSIKSFIETLYEYGEQMSSAERLDYLEIA
NRETDRLTRLVNDVLDLSRLESGKQYHFEGVDIAAVIEQTLRTHQLQARDKGIQLRKFVDPDLPLVWGNYDLLLQVMTNL
LGNALKFTPSGGLVTVHAHLVVQADGSPQAVRVAVADTGIGIAPEDQERIFDRFFRVENRVHTLEGTGLGLAIVRNILEK
HRTRICLESKLEQGSTFWFDLHLYTEEGPLEFEVQPAETDPPSCCWREHASNPQNPELC

Specific function: Member Of The Two-Component Regulatory System Phor/Phob Involved In The Phosphate Regulon Genes Expression. Phor May Function As A Membrane-Associated Protein Kinase That Phosphorylates Phob In Response To Environmental Signals. [C]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1786600, Length=372, Percent_Identity=29.3010752688172, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1789149, Length=243, Percent_Identity=33.7448559670782, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI145693157, Length=253, Percent_Identity=32.8063241106719, Blast_Score=112, Evalue=8e-26,
Organism=Escherichia coli, GI1788713, Length=253, Percent_Identity=32.4110671936759, Blast_Score=109, Evalue=5e-25,
Organism=Escherichia coli, GI1790436, Length=235, Percent_Identity=31.9148936170213, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1788549, Length=391, Percent_Identity=25.8312020460358, Blast_Score=106, Evalue=4e-24,
Organism=Escherichia coli, GI1788393, Length=214, Percent_Identity=33.6448598130841, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI1786783, Length=289, Percent_Identity=28.0276816608997, Blast_Score=99, Evalue=7e-22,
Organism=Escherichia coli, GI48994928, Length=233, Percent_Identity=33.4763948497854, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1790346, Length=215, Percent_Identity=29.3023255813954, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI87081816, Length=249, Percent_Identity=29.718875502008, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1790861, Length=256, Percent_Identity=28.515625, Blast_Score=87, Evalue=5e-18,
Organism=Escherichia coli, GI87082128, Length=231, Percent_Identity=26.8398268398268, Blast_Score=86, Evalue=1e-17,
Organism=Escherichia coli, GI1790300, Length=348, Percent_Identity=25.5747126436782, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1787894, Length=233, Percent_Identity=32.1888412017167, Blast_Score=82, Evalue=2e-16,
Organism=Escherichia coli, GI1786912, Length=232, Percent_Identity=28.8793103448276, Blast_Score=73, Evalue=8e-14,
Organism=Escherichia coli, GI1789403, Length=222, Percent_Identity=31.0810810810811, Blast_Score=63, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR000014
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 78143; Mature: 78011

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS50885 HAMP ; PS50112 PAS ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPVSTVEPAEPIAEVQSPELASSPAEPLPGAVDMSVPTTTGISMGSLRRWWARWKQKLR
CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHH
LETQLLFVATLVVSLVVSSFTFWAVSTVQQDARFNEARFGRDLGLLLAANVAPLIAEDRI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHCCHHHHHHHHC
GEVAQLSRQYFESTSSIRYLLYADPEGNIYYGIPFSNQEVKTSLSLTRRMQLPDNRPPAE
CHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC
GQPLVRTHLTPAGRVTDIFVGIYHQGRFLGTLGLGINPNPALVRSTQLAREVSIGVFLAV
CCCCCEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
WVLAILGAVVNALTITYPIKELVKGVQEITKGNFKQRIDLPFGGELAQLIDSFNEMAERL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHH
QSYEEQNIEELAAAKAKLETLVFSIVDAAILLDAELRVLLLNPAASRMFGWEGDPVLGKP
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCCCCC
LPELLPEDLQQQLARPLMQIARGDQEAEEVRVNLTGPTKRVIRILLSPVSDPRRQNLKGI
CHHHCHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCHHHHHHHHHHHCCCCHHHCCCCCE
VMTVQDITREVELNEAKAQFISNISHELRTPLFSIKSFIETLYEYGEQMSSAERLDYLEI
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANRETDRLTRLVNDVLDLSRLESGKQYHFEGVDIAAVIEQTLRTHQLQARDKGIQLRKFV
HCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCEEHHHC
DPDLPLVWGNYDLLLQVMTNLLGNALKFTPSGGLVTVHAHLVVQADGSPQAVRVAVADTG
CCCCCEEECCHHHHHHHHHHHHCCCEEECCCCCEEEEEEEEEEEECCCCCEEEEEEECCC
IGIAPEDQERIFDRFFRVENRVHTLEGTGLGLAIVRNILEKHRTRICLESKLEQGSTFWF
CCCCCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
DLHLYTEEGPLEFEVQPAETDPPSCCWREHASNPQNPELC
EEEEEECCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PPVSTVEPAEPIAEVQSPELASSPAEPLPGAVDMSVPTTTGISMGSLRRWWARWKQKLR
CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHH
LETQLLFVATLVVSLVVSSFTFWAVSTVQQDARFNEARFGRDLGLLLAANVAPLIAEDRI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHCCHHHHHHHHC
GEVAQLSRQYFESTSSIRYLLYADPEGNIYYGIPFSNQEVKTSLSLTRRMQLPDNRPPAE
CHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC
GQPLVRTHLTPAGRVTDIFVGIYHQGRFLGTLGLGINPNPALVRSTQLAREVSIGVFLAV
CCCCCEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
WVLAILGAVVNALTITYPIKELVKGVQEITKGNFKQRIDLPFGGELAQLIDSFNEMAERL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHH
QSYEEQNIEELAAAKAKLETLVFSIVDAAILLDAELRVLLLNPAASRMFGWEGDPVLGKP
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCCCCC
LPELLPEDLQQQLARPLMQIARGDQEAEEVRVNLTGPTKRVIRILLSPVSDPRRQNLKGI
CHHHCHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCHHHHHHHHHHHCCCCHHHCCCCCE
VMTVQDITREVELNEAKAQFISNISHELRTPLFSIKSFIETLYEYGEQMSSAERLDYLEI
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANRETDRLTRLVNDVLDLSRLESGKQYHFEGVDIAAVIEQTLRTHQLQARDKGIQLRKFV
HCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCEEHHHC
DPDLPLVWGNYDLLLQVMTNLLGNALKFTPSGGLVTVHAHLVVQADGSPQAVRVAVADTG
CCCCCEEECCHHHHHHHHHHHHCCCEEECCCCCEEEEEEEEEEEECCCCCEEEEEEECCC
IGIAPEDQERIFDRFFRVENRVHTLEGTGLGLAIVRNILEKHRTRICLESKLEQGSTFWF
CCCCCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
DLHLYTEEGPLEFEVQPAETDPPSCCWREHASNPQNPELC
EEEEEECCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8535519; 8905231; 3141423 [H]