Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609848

Identifier: 86609848

GI number: 86609848

Start: 2509469

End: 2510266

Strand: Direct

Name: 86609848

Synonym: CYB_2412

Alternate gene names: NA

Gene position: 2509469-2510266 (Clockwise)

Preceding gene: 86609847

Following gene: 86609849

Centisome position: 82.37

GC content: 62.03

Gene sequence:

>798_bases
ATGCAACTGACCCGCATCGACCTCAACAGTTGGCTCATCCACACCCGGGAGCAAACCTTCCTATTGGATCCGTGGCTGGT
GGATCCCCTGGTGTTTCTGGGGATCCCCTGGTTCATCCGCCTGGAGCACCGCCAGCCGCTCCCTTTTACGCCGGAGACCT
TGCCCAAAATCGACGGGATCCTCCTCAGCCAAGCCCAGCCGGATCACTGCCACCCACCAACGTTGCAGCGCCTGGATAAG
CGGATCCCCGTTTTGGCCTCGCCGGCTGCAGCCAGAGTCGTGAAGAGTCTAGGATTTGCAACGGTTCAGGCTCTGGATCC
CTGGCAGTCTGTTCGCTGGGGGGATCTGCGGGTCACGGCCATTCCCGGTGCGCCCCTAGGGCCTGTCCGTGAGCTGGGCT
ATCTGCTGGAAGAGGTGCCCTCTCAGACACGGCTTTACTACGAGCCTCATCTTTCCCAACCGGATGTCCGCCCGCGGCTG
CAGCAGGAGTTTGGCTCCATCCATACCCTACTGATTCCGGTGGTGGGGCAGATCTTTCCCCTCTTGGGAGAGGTGATCAT
GGGGCCAGAGCGGGCCCTGGAGGTGGTGGCAGCCCTACGCCCCCAGCAGGTGATCCCTACGGCGATGGGAGAGGTGGACT
ACCACGGGTGGTTTGCCGCCCAGATCCGCCCCTTGGGCAGCCTGCAGGAGTTTCGAGAAAAGCTGGCAGCCTTGAATGCC
GCCACGTCCCAATCCATCCAGTTGTGTTGCCCCGCCCCTGGGGAAACGGTGTCTCTTTCTGTCGTGGCCAAGACATGA

Upstream 100 bases:

>100_bases
CTACGTCGAGCCCGAGCCGCAAGTCACACCGGGTGGGCTGTGTCCCCGCATCTGGGTTGCCGATCTCTCCATTACCGGGC
AATAACCTCACTTCAAACTC

Downstream 100 bases:

>100_bases
GCCTTCCTTCCCAAGCCCCGCCTAGCGCCGATCTGGTGGCCATCTTGCGGGCAGATTACGCTCGCTTTCCCCGGGATCAG
ACCTATGCGATCTACGACCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MQLTRIDLNSWLIHTREQTFLLDPWLVDPLVFLGIPWFIRLEHRQPLPFTPETLPKIDGILLSQAQPDHCHPPTLQRLDK
RIPVLASPAAARVVKSLGFATVQALDPWQSVRWGDLRVTAIPGAPLGPVRELGYLLEEVPSQTRLYYEPHLSQPDVRPRL
QQEFGSIHTLLIPVVGQIFPLLGEVIMGPERALEVVAALRPQQVIPTAMGEVDYHGWFAAQIRPLGSLQEFREKLAALNA
ATSQSIQLCCPAPGETVSLSVVAKT

Sequences:

>Translated_265_residues
MQLTRIDLNSWLIHTREQTFLLDPWLVDPLVFLGIPWFIRLEHRQPLPFTPETLPKIDGILLSQAQPDHCHPPTLQRLDK
RIPVLASPAAARVVKSLGFATVQALDPWQSVRWGDLRVTAIPGAPLGPVRELGYLLEEVPSQTRLYYEPHLSQPDVRPRL
QQEFGSIHTLLIPVVGQIFPLLGEVIMGPERALEVVAALRPQQVIPTAMGEVDYHGWFAAQIRPLGSLQEFREKLAALNA
ATSQSIQLCCPAPGETVSLSVVAKT
>Mature_265_residues
MQLTRIDLNSWLIHTREQTFLLDPWLVDPLVFLGIPWFIRLEHRQPLPFTPETLPKIDGILLSQAQPDHCHPPTLQRLDK
RIPVLASPAAARVVKSLGFATVQALDPWQSVRWGDLRVTAIPGAPLGPVRELGYLLEEVPSQTRLYYEPHLSQPDVRPRL
QQEFGSIHTLLIPVVGQIFPLLGEVIMGPERALEVVAALRPQQVIPTAMGEVDYHGWFAAQIRPLGSLQEFREKLAALNA
ATSQSIQLCCPAPGETVSLSVVAKT

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29517; Mature: 29517

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTRIDLNSWLIHTREQTFLLDPWLVDPLVFLGIPWFIRLEHRQPLPFTPETLPKIDGI
CCEEEEEHHHHEEEECCCEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCE
LLSQAQPDHCHPPTLQRLDKRIPVLASPAAARVVKSLGFATVQALDPWQSVRWGDLRVTA
EECCCCCCCCCCHHHHHHHHCCCEEECHHHHHHHHHHCHHHHHHCCCHHHCCCCCEEEEE
IPGAPLGPVRELGYLLEEVPSQTRLYYEPHLSQPDVRPRLQQEFGSIHTLLIPVVGQIFP
ECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLGEVIMGPERALEVVAALRPQQVIPTAMGEVDYHGWFAAQIRPLGSLQEFREKLAALNA
HHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEHHCCCCCHHHHHHHHHHHHH
ATSQSIQLCCPAPGETVSLSVVAKT
CCCCCEEEEECCCCCEEEEEEEECC
>Mature Secondary Structure
MQLTRIDLNSWLIHTREQTFLLDPWLVDPLVFLGIPWFIRLEHRQPLPFTPETLPKIDGI
CCEEEEEHHHHEEEECCCEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCE
LLSQAQPDHCHPPTLQRLDKRIPVLASPAAARVVKSLGFATVQALDPWQSVRWGDLRVTA
EECCCCCCCCCCHHHHHHHHCCCEEECHHHHHHHHHHCHHHHHHCCCHHHCCCCCEEEEE
IPGAPLGPVRELGYLLEEVPSQTRLYYEPHLSQPDVRPRLQQEFGSIHTLLIPVVGQIFP
ECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLGEVIMGPERALEVVAALRPQQVIPTAMGEVDYHGWFAAQIRPLGSLQEFREKLAALNA
HHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEHHCCCCCHHHHHHHHHHHHH
ATSQSIQLCCPAPGETVSLSVVAKT
CCCCCEEEEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA