Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609849

Identifier: 86609849

GI number: 86609849

Start: 2510263

End: 2510691

Strand: Direct

Name: 86609849

Synonym: CYB_2413

Alternate gene names: NA

Gene position: 2510263-2510691 (Clockwise)

Preceding gene: 86609848

Following gene: 86609852

Centisome position: 82.39

GC content: 58.74

Gene sequence:

>429_bases
ATGAGCCTTCCTTCCCAAGCCCCGCCTAGCGCCGATCTGGTGGCCATCTTGCGGGCAGATTACGCTCGCTTTCCCCGGGA
TCAGACCTATGCGATCTACGACCCGCAGGTTTACTTCCGGGATCCCCTCAACGAGTTTCGCGGCTTGGATCGCTATCGCC
GCATGATCGAGGGGATAGGGCGTTGGCTACAGGATATCCGTCTCGATCTGCAGGATATTCGGCAAACCGGCAACCAGATC
CGCACCGAGTGGATCCTGAGCGGTGCTTTGGCTTTGCCTTGGCGTCCCCGCCTGTGCATCCCCGGCTGGACAGAGATGCA
GATCAATGAGACGGGGTTGATCGGATCCCATGTTGATTACTGGCGGTGCTCTCGCCGGCAAGTGTTGCTGCAAATGTTTC
GGCCTGGGGATCCCAAAGGATCCCGTTAA

Upstream 100 bases:

>100_bases
GAGAAAAGCTGGCAGCCTTGAATGCCGCCACGTCCCAATCCATCCAGTTGTGTTGCCCCGCCCCTGGGGAAACGGTGTCT
CTTTCTGTCGTGGCCAAGAC

Downstream 100 bases:

>100_bases
TAGCTTCCATCCTTTGCTAGGATCACAAAGCTGACTTTTTAGCCCTCCTGGAAAGTCGCCCCTGTTCTCAATCTGGAGAG
ATGGCCGAGTGGTCGAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSLPSQAPPSADLVAILRADYARFPRDQTYAIYDPQVYFRDPLNEFRGLDRYRRMIEGIGRWLQDIRLDLQDIRQTGNQI
RTEWILSGALALPWRPRLCIPGWTEMQINETGLIGSHVDYWRCSRRQVLLQMFRPGDPKGSR

Sequences:

>Translated_142_residues
MSLPSQAPPSADLVAILRADYARFPRDQTYAIYDPQVYFRDPLNEFRGLDRYRRMIEGIGRWLQDIRLDLQDIRQTGNQI
RTEWILSGALALPWRPRLCIPGWTEMQINETGLIGSHVDYWRCSRRQVLLQMFRPGDPKGSR
>Mature_141_residues
SLPSQAPPSADLVAILRADYARFPRDQTYAIYDPQVYFRDPLNEFRGLDRYRRMIEGIGRWLQDIRLDLQDIRQTGNQIR
TEWILSGALALPWRPRLCIPGWTEMQINETGLIGSHVDYWRCSRRQVLLQMFRPGDPKGSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16677; Mature: 16546

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPSQAPPSADLVAILRADYARFPRDQTYAIYDPQVYFRDPLNEFRGLDRYRRMIEGIG
CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEECCHHHHHHHHHHHHHHHHHHH
RWLQDIRLDLQDIRQTGNQIRTEWILSGALALPWRPRLCIPGWTEMQINETGLIGSHVDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCEECCCCCCEEECCCCCCCCCCHH
WRCSRRQVLLQMFRPGDPKGSR
HHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SLPSQAPPSADLVAILRADYARFPRDQTYAIYDPQVYFRDPLNEFRGLDRYRRMIEGIG
CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEECCHHHHHHHHHHHHHHHHHHH
RWLQDIRLDLQDIRQTGNQIRTEWILSGALALPWRPRLCIPGWTEMQINETGLIGSHVDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCEECCCCCCEEECCCCCCCCCCHH
WRCSRRQVLLQMFRPGDPKGSR
HHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA