| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609849
Identifier: 86609849
GI number: 86609849
Start: 2510263
End: 2510691
Strand: Direct
Name: 86609849
Synonym: CYB_2413
Alternate gene names: NA
Gene position: 2510263-2510691 (Clockwise)
Preceding gene: 86609848
Following gene: 86609852
Centisome position: 82.39
GC content: 58.74
Gene sequence:
>429_bases ATGAGCCTTCCTTCCCAAGCCCCGCCTAGCGCCGATCTGGTGGCCATCTTGCGGGCAGATTACGCTCGCTTTCCCCGGGA TCAGACCTATGCGATCTACGACCCGCAGGTTTACTTCCGGGATCCCCTCAACGAGTTTCGCGGCTTGGATCGCTATCGCC GCATGATCGAGGGGATAGGGCGTTGGCTACAGGATATCCGTCTCGATCTGCAGGATATTCGGCAAACCGGCAACCAGATC CGCACCGAGTGGATCCTGAGCGGTGCTTTGGCTTTGCCTTGGCGTCCCCGCCTGTGCATCCCCGGCTGGACAGAGATGCA GATCAATGAGACGGGGTTGATCGGATCCCATGTTGATTACTGGCGGTGCTCTCGCCGGCAAGTGTTGCTGCAAATGTTTC GGCCTGGGGATCCCAAAGGATCCCGTTAA
Upstream 100 bases:
>100_bases GAGAAAAGCTGGCAGCCTTGAATGCCGCCACGTCCCAATCCATCCAGTTGTGTTGCCCCGCCCCTGGGGAAACGGTGTCT CTTTCTGTCGTGGCCAAGAC
Downstream 100 bases:
>100_bases TAGCTTCCATCCTTTGCTAGGATCACAAAGCTGACTTTTTAGCCCTCCTGGAAAGTCGCCCCTGTTCTCAATCTGGAGAG ATGGCCGAGTGGTCGAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSLPSQAPPSADLVAILRADYARFPRDQTYAIYDPQVYFRDPLNEFRGLDRYRRMIEGIGRWLQDIRLDLQDIRQTGNQI RTEWILSGALALPWRPRLCIPGWTEMQINETGLIGSHVDYWRCSRRQVLLQMFRPGDPKGSR
Sequences:
>Translated_142_residues MSLPSQAPPSADLVAILRADYARFPRDQTYAIYDPQVYFRDPLNEFRGLDRYRRMIEGIGRWLQDIRLDLQDIRQTGNQI RTEWILSGALALPWRPRLCIPGWTEMQINETGLIGSHVDYWRCSRRQVLLQMFRPGDPKGSR >Mature_141_residues SLPSQAPPSADLVAILRADYARFPRDQTYAIYDPQVYFRDPLNEFRGLDRYRRMIEGIGRWLQDIRLDLQDIRQTGNQIR TEWILSGALALPWRPRLCIPGWTEMQINETGLIGSHVDYWRCSRRQVLLQMFRPGDPKGSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16677; Mature: 16546
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPSQAPPSADLVAILRADYARFPRDQTYAIYDPQVYFRDPLNEFRGLDRYRRMIEGIG CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEECCHHHHHHHHHHHHHHHHHHH RWLQDIRLDLQDIRQTGNQIRTEWILSGALALPWRPRLCIPGWTEMQINETGLIGSHVDY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCEECCCCCCEEECCCCCCCCCCHH WRCSRRQVLLQMFRPGDPKGSR HHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SLPSQAPPSADLVAILRADYARFPRDQTYAIYDPQVYFRDPLNEFRGLDRYRRMIEGIG CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEECCHHHHHHHHHHHHHHHHHHH RWLQDIRLDLQDIRQTGNQIRTEWILSGALALPWRPRLCIPGWTEMQINETGLIGSHVDY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCEECCCCCCEEECCCCCCCCCCHH WRCSRRQVLLQMFRPGDPKGSR HHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA