| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609730
Identifier: 86609730
GI number: 86609730
Start: 2395303
End: 2395812
Strand: Direct
Name: 86609730
Synonym: CYB_2289
Alternate gene names: NA
Gene position: 2395303-2395812 (Clockwise)
Preceding gene: 86609729
Following gene: 86609731
Centisome position: 78.62
GC content: 59.02
Gene sequence:
>510_bases ATGGCCCTGGGCTTGGGGTTGATTGCCTTGTCCTCGGCTCTCTGTTTTGGCTTCTTGGCCGTTGGGCAGCACTATCTCTA CGGGGATGGATCCGCTGTGGATTTCCAGCCTGCCGGGGAGAGTTTGGCCTTGTCTTCCGCCCCCGAGATTGGACTTCCGA CGACACCGCCCCTCCCTAACCCCCCCTCTTCCGACGGCAATCTCCCAGAGGGATCCCCGCTGCAGCTCTGGCTTGTTACT TTTTTAACCGTGTTTGTGGCGGAAATGGGCGACAAAACCCAGTTGGCAACCTTGCTCATGAGTGCCCAATCCCAATCTCC TTGGGCGATCTTTTTCGGTTCCGCCGGTGCCTTGGTGACCGCCAGTTTTTTCAGCGTGGTGCTGGGAGAAGGTCTGGGGC AAGTCATTCCCCCAGGCTGGCTACAATGGTTGGCGGGTGCAGGGTTCCTGGTGATCGGGGGCTATGTATTATGGCAGGAG TGGCGGGGGAACAAGCTCCCAGAGGGCTAG
Upstream 100 bases:
>100_bases GCGCCCTTGTCTCCTCCAGAAGCGGCTGAAAACAGGATAAGCTGCATGTCGGTGGTTAGGATCTGACGCCATGGCTGCGC CGCGTTCTTGGCAGGGGCAA
Downstream 100 bases:
>100_bases CCTCCCTGAGCAGCCGATGCCAACCCGGCAGGACAGAGTGGAGAACAACCGAGGAACGTGTTGATCCAAGACAACGACAG CCGAACCCCGTCTTTTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MALGLGLIALSSALCFGFLAVGQHYLYGDGSAVDFQPAGESLALSSAPEIGLPTTPPLPNPPSSDGNLPEGSPLQLWLVT FLTVFVAEMGDKTQLATLLMSAQSQSPWAIFFGSAGALVTASFFSVVLGEGLGQVIPPGWLQWLAGAGFLVIGGYVLWQE WRGNKLPEG
Sequences:
>Translated_169_residues MALGLGLIALSSALCFGFLAVGQHYLYGDGSAVDFQPAGESLALSSAPEIGLPTTPPLPNPPSSDGNLPEGSPLQLWLVT FLTVFVAEMGDKTQLATLLMSAQSQSPWAIFFGSAGALVTASFFSVVLGEGLGQVIPPGWLQWLAGAGFLVIGGYVLWQE WRGNKLPEG >Mature_168_residues ALGLGLIALSSALCFGFLAVGQHYLYGDGSAVDFQPAGESLALSSAPEIGLPTTPPLPNPPSSDGNLPEGSPLQLWLVTF LTVFVAEMGDKTQLATLLMSAQSQSPWAIFFGSAGALVTASFFSVVLGEGLGQVIPPGWLQWLAGAGFLVIGGYVLWQEW RGNKLPEG
Specific function: Unknown
COG id: COG2119
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17608; Mature: 17477
Theoretical pI: Translated: 3.84; Mature: 3.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALGLGLIALSSALCFGFLAVGQHYLYGDGSAVDFQPAGESLALSSAPEIGLPTTPPLPN CCCCHHHHHHHHHHHHHHHHHCCEEEECCCCEEECCCCCCCEECCCCCCCCCCCCCCCCC PPSSDGNLPEGSPLQLWLVTFLTVFVAEMGDKTQLATLLMSAQSQSPWAIFFGSAGALVT CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHH ASFFSVVLGEGLGQVIPPGWLQWLAGAGFLVIGGYVLWQEWRGNKLPEG HHHHHHHHHCCCCCCCCHHHHHHHHCCCEEHHHHHHEEHHHCCCCCCCC >Mature Secondary Structure ALGLGLIALSSALCFGFLAVGQHYLYGDGSAVDFQPAGESLALSSAPEIGLPTTPPLPN CCCHHHHHHHHHHHHHHHHHCCEEEECCCCEEECCCCCCCEECCCCCCCCCCCCCCCCC PPSSDGNLPEGSPLQLWLVTFLTVFVAEMGDKTQLATLLMSAQSQSPWAIFFGSAGALVT CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHH ASFFSVVLGEGLGQVIPPGWLQWLAGAGFLVIGGYVLWQEWRGNKLPEG HHHHHHHHHCCCCCCCCHHHHHHHHCCCEEHHHHHHEEHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA