| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609716
Identifier: 86609716
GI number: 86609716
Start: 2379525
End: 2380301
Strand: Reverse
Name: 86609716
Synonym: CYB_2274
Alternate gene names: NA
Gene position: 2380301-2379525 (Counterclockwise)
Preceding gene: 86609717
Following gene: 86609715
Centisome position: 78.13
GC content: 48.52
Gene sequence:
>777_bases ATGTCTAAGCTGGACTTAAAAAATGCACCTGGACACCAGGTACTGGCTGCGGCAGGTAAAAAGGCACTTCGACCGGGGGG CTTTGGCGCTACCGAACGGCTCTTCAAGTTTGCCGAGTTCCGTCGAGGAGAAACTGTGCTGGAACTTGCCTCAGGCCTTG GCTACACGGCTATTCGATTGGCAAAGCGCTATGGCATACATGTTACCGGCATTGAGAAAAATCCAGATAACATTGCTCGC ACTCGCGCTAATGTTTCTGCAGCAGGGCTAGCCGGCCAAGTTGAGATCCTCGAGGGCGATATCTTTCACCTAGATCAAAT CGATCAGAAATTTGACTATGTCTTGGCGGAAGCTATTTTAACAATGCAGTCCGATGCAGGAAAATCTAAGATTTTGTCAG GGATTTACAATTGCCTCAAGCCAGGGGGTAAGTTCCTCAGCCATGAGCTGCGAGTTGAGGGATCCAACAGCGACGCTATC CGCAAGGAGTTATCCTCCGTAATCCATGTCAATGCCAATCCTTTATCTACTGACAGCTGGCTTGCAACTGTTCAGCAAGC AAATCTTACGGTTGTCCAGTATGCCACCGGCCCCTTAACTTTGCTCAATCCCGTTGCTATTGCTACAGAGGAAGGATTGC CGACGCTCTTAACTATGGTGTGGAATGTGCTTACACGTCCTGTAATCCGGCAGCGGATCTTATCTATGAAGCAAATCTTT AGCCGATATCGAAATAACCTAGGCTACATCATACTGATTGCCAAGAAGGAGGCTTAA
Upstream 100 bases:
>100_bases AACCAACTTCGGAAGGAGGATGGATTGATCAGTAGTAAAGAAGTCTTCACTATCTGCTCCATGCTATATTTCCCAATTCT GCAAAGCTTTGGAGTTACCT
Downstream 100 bases:
>100_bases TGATGTCTCTTGTCTCCCCTGAGTCACCTTTTTTGCAGCTCAAAGATCACATTGCTTATTCTGTGGAAGGAGTTCTCAGC AAGATCATTTGGAAAAGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSKLDLKNAPGHQVLAAAGKKALRPGGFGATERLFKFAEFRRGETVLELASGLGYTAIRLAKRYGIHVTGIEKNPDNIAR TRANVSAAGLAGQVEILEGDIFHLDQIDQKFDYVLAEAILTMQSDAGKSKILSGIYNCLKPGGKFLSHELRVEGSNSDAI RKELSSVIHVNANPLSTDSWLATVQQANLTVVQYATGPLTLLNPVAIATEEGLPTLLTMVWNVLTRPVIRQRILSMKQIF SRYRNNLGYIILIAKKEA
Sequences:
>Translated_258_residues MSKLDLKNAPGHQVLAAAGKKALRPGGFGATERLFKFAEFRRGETVLELASGLGYTAIRLAKRYGIHVTGIEKNPDNIAR TRANVSAAGLAGQVEILEGDIFHLDQIDQKFDYVLAEAILTMQSDAGKSKILSGIYNCLKPGGKFLSHELRVEGSNSDAI RKELSSVIHVNANPLSTDSWLATVQQANLTVVQYATGPLTLLNPVAIATEEGLPTLLTMVWNVLTRPVIRQRILSMKQIF SRYRNNLGYIILIAKKEA >Mature_257_residues SKLDLKNAPGHQVLAAAGKKALRPGGFGATERLFKFAEFRRGETVLELASGLGYTAIRLAKRYGIHVTGIEKNPDNIART RANVSAAGLAGQVEILEGDIFHLDQIDQKFDYVLAEAILTMQSDAGKSKILSGIYNCLKPGGKFLSHELRVEGSNSDAIR KELSSVIHVNANPLSTDSWLATVQQANLTVVQYATGPLTLLNPVAIATEEGLPTLLTMVWNVLTRPVIRQRILSMKQIFS RYRNNLGYIILIAKKEA
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 28197; Mature: 28066
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLDLKNAPGHQVLAAAGKKALRPGGFGATERLFKFAEFRRGETVLELASGLGYTAIRL CCCCCCCCCCCHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHH AKRYGIHVTGIEKNPDNIARTRANVSAAGLAGQVEILEGDIFHLDQIDQKFDYVLAEAIL HHHHCEEEEECCCCCHHHHHHHCCCHHHCCCCEEEEECCCEEEHHHHHHHHHHHHHHHHH TMQSDAGKSKILSGIYNCLKPGGKFLSHELRVEGSNSDAIRKELSSVIHVNANPLSTDSW HHHCCCCHHHHHHHHHHHHCCCHHHHHHEEEEECCCCHHHHHHHHHHEECCCCCCCCHHH LATVQQANLTVVQYATGPLTLLNPVAIATEEGLPTLLTMVWNVLTRPVIRQRILSMKQIF HHHHHHCCEEEEEECCCCCHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SRYRNNLGYIILIAKKEA HHHHCCCCEEEEEEECCC >Mature Secondary Structure SKLDLKNAPGHQVLAAAGKKALRPGGFGATERLFKFAEFRRGETVLELASGLGYTAIRL CCCCCCCCCCHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHH AKRYGIHVTGIEKNPDNIARTRANVSAAGLAGQVEILEGDIFHLDQIDQKFDYVLAEAIL HHHHCEEEEECCCCCHHHHHHHCCCHHHCCCCEEEEECCCEEEHHHHHHHHHHHHHHHHH TMQSDAGKSKILSGIYNCLKPGGKFLSHELRVEGSNSDAIRKELSSVIHVNANPLSTDSW HHHCCCCHHHHHHHHHHHHCCCHHHHHHEEEEECCCCHHHHHHHHHHEECCCCCCCCHHH LATVQQANLTVVQYATGPLTLLNPVAIATEEGLPTLLTMVWNVLTRPVIRQRILSMKQIF HHHHHHCCEEEEEECCCCCHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SRYRNNLGYIILIAKKEA HHHHCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]