| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609707
Identifier: 86609707
GI number: 86609707
Start: 2370236
End: 2370979
Strand: Reverse
Name: 86609707
Synonym: CYB_2265
Alternate gene names: NA
Gene position: 2370979-2370236 (Counterclockwise)
Preceding gene: 86609708
Following gene: 86609706
Centisome position: 77.82
GC content: 50.94
Gene sequence:
>744_bases ATGAGTTTAAGCTCCGCTTCTGCGCTCGCTTTTGAGGCCCTGTATCTGGGCATTTCTCCCAGTCTCAAGCTCTTTGATCA GCCTTTATTAGGATCCCTGGGGAAATGCTTTCGGATAGCCTACTGGGAGTACCACCAAACCCAGGATGAGCCTTGTAGCC TGGAGACTGTAATCACGCTGCTATACGAATATCTCAAAGCTTGGGATCGACCCGTTCATCTTATCGGCCACGGCTTGAGC GGGGTGGCCGCTTATCTTTTTGCCTGCCGTTACCCACAGCGGGTACAGTCTCTGACCTTGCTGGCCGTGGGAGGTTGGCC TGCTACCACTTGGCATGCCCATTTCTATGTGCAGCGAAAAATCTTTTGCTGGAGTCGGGAACAACTCTTGGTGCGTATAG CCCAGAGCCTTCTACCTACTTCAGAACAGTGGCGAGCACGCTCACTCTCCTATGCTCTGGCTAAAGATTTGGATACTTCT CCCATACCTCACTCCCTATTTCAGGTGATAGCGATTCCAGCCCAGAAAGTGTCGGTGCCGATGTTGGTTTGCGCCAGCAA GGATGACCCCATTGTGGATCCTGCTTCGCTCGAGAAGTGGAGAAACCACCTAAAGCCAGGGGATCAAATGTGGTTTTGCC CTGGGGGGCGACACTTTTTTCATCATTCTTTTCCAAGTTTGGTCAATCTGAAAATAATGGATTTTTGGCAGGAATTGCGT AAACTTCAGCCCAGCATGGCTTAG
Upstream 100 bases:
>100_bases AACCGCACTTTGCCGGTTGGTTTCTGGCTACTGGACTTTGTAGATCTTTTGTTTGGCTAGCAGCCTTGATGGTTTTAACA GTCGAGATGGAATAGCGAAT
Downstream 100 bases:
>100_bases GGCGGCTGGACTTTCGCGGGATGATAGAATGGCTACTCATCCAAACAGCAGAGGAGCTCCGTTTGCAGCTAGGGCGAAGC AGCCCAGGTGGAGCCCCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MSLSSASALAFEALYLGISPSLKLFDQPLLGSLGKCFRIAYWEYHQTQDEPCSLETVITLLYEYLKAWDRPVHLIGHGLS GVAAYLFACRYPQRVQSLTLLAVGGWPATTWHAHFYVQRKIFCWSREQLLVRIAQSLLPTSEQWRARSLSYALAKDLDTS PIPHSLFQVIAIPAQKVSVPMLVCASKDDPIVDPASLEKWRNHLKPGDQMWFCPGGRHFFHHSFPSLVNLKIMDFWQELR KLQPSMA
Sequences:
>Translated_247_residues MSLSSASALAFEALYLGISPSLKLFDQPLLGSLGKCFRIAYWEYHQTQDEPCSLETVITLLYEYLKAWDRPVHLIGHGLS GVAAYLFACRYPQRVQSLTLLAVGGWPATTWHAHFYVQRKIFCWSREQLLVRIAQSLLPTSEQWRARSLSYALAKDLDTS PIPHSLFQVIAIPAQKVSVPMLVCASKDDPIVDPASLEKWRNHLKPGDQMWFCPGGRHFFHHSFPSLVNLKIMDFWQELR KLQPSMA >Mature_246_residues SLSSASALAFEALYLGISPSLKLFDQPLLGSLGKCFRIAYWEYHQTQDEPCSLETVITLLYEYLKAWDRPVHLIGHGLSG VAAYLFACRYPQRVQSLTLLAVGGWPATTWHAHFYVQRKIFCWSREQLLVRIAQSLLPTSEQWRARSLSYALAKDLDTSP IPHSLFQVIAIPAQKVSVPMLVCASKDDPIVDPASLEKWRNHLKPGDQMWFCPGGRHFFHHSFPSLVNLKIMDFWQELRK LQPSMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To Synechocystis PCC 6803 sll0249 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28158; Mature: 28027
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSSASALAFEALYLGISPSLKLFDQPLLGSLGKCFRIAYWEYHQTQDEPCSLETVITL CCCCHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH LYEYLKAWDRPVHLIGHGLSGVAAYLFACRYPQRVQSLTLLAVGGWPATTWHAHFYVQRK HHHHHHHCCCCHHHHHCCHHHHHHHHHHHCCHHHHHHEEEEEECCCCCCCEEEEEEEEHH IFCWSREQLLVRIAQSLLPTSEQWRARSLSYALAKDLDTSPIPHSLFQVIAIPAQKVSVP HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHCCCC MLVCASKDDPIVDPASLEKWRNHLKPGDQMWFCPGGRHFFHHSFPSLVNLKIMDFWQELR EEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHCCCCHHHHHHHHHHHHHHH KLQPSMA HHCCCCC >Mature Secondary Structure SLSSASALAFEALYLGISPSLKLFDQPLLGSLGKCFRIAYWEYHQTQDEPCSLETVITL CCCHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH LYEYLKAWDRPVHLIGHGLSGVAAYLFACRYPQRVQSLTLLAVGGWPATTWHAHFYVQRK HHHHHHHCCCCHHHHHCCHHHHHHHHHHHCCHHHHHHEEEEEECCCCCCCEEEEEEEEHH IFCWSREQLLVRIAQSLLPTSEQWRARSLSYALAKDLDTSPIPHSLFQVIAIPAQKVSVP HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHCCCC MLVCASKDDPIVDPASLEKWRNHLKPGDQMWFCPGGRHFFHHSFPSLVNLKIMDFWQELR EEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHCCCCHHHHHHHHHHHHHHH KLQPSMA HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]