| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609672
Identifier: 86609672
GI number: 86609672
Start: 2334173
End: 2334544
Strand: Direct
Name: 86609672
Synonym: CYB_2228
Alternate gene names: NA
Gene position: 2334173-2334544 (Clockwise)
Preceding gene: 86609671
Following gene: 86609673
Centisome position: 76.61
GC content: 61.02
Gene sequence:
>372_bases ATGGCTGAAAACCGGACTGGCGCGTTTATTGGTGGGCTGTTGCTGGGAACTGCTGTGGGCACCGCCATTGGCCTGCTCTT GGCTCCCCGCAGCGGACGGGAGACGCGGCGACTGCTGAAGAAATCGGCAGAGGCCCTGCCAGAGGTGGCAGAAGATGTGA CCAGCAGTCTGCAATATCAATCGGAAAAGTTGTTCGACGCTGCCCAACGCAGTTTGGATGAGGCTCTGCTGCGGCTGCAG CAGGCAGTGGCGGTGGGCAAAGAAGCCATGTTGCAGAAGCGAAGGGAGCTGCTCCAAGCCCAGAACTCGCGTCCCTTTGG CGGGGAAGAAGCTGACCTAGAAGCTCGGGATGGGGAGGAGGCGGCGGGATGA
Upstream 100 bases:
>100_bases CGGCGCGCGGCAAGCCCGCCGATCCCGCGAGATCTTCCCGCGAGATCTTAAGGTAGTCTGGTTTCGGGGCCACCCGTATC CAACTCAACTCTGGCAAAGC
Downstream 100 bases:
>100_bases ACGACCCGGTCTTTTGGCTCGGCCTCTCGGTAGGCCTGGTAGCAGTGGGCATTTTGGCAGTGATCCTGACCCTACTACCT GCCGTCATTCAACTGGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MAENRTGAFIGGLLLGTAVGTAIGLLLAPRSGRETRRLLKKSAEALPEVAEDVTSSLQYQSEKLFDAAQRSLDEALLRLQ QAVAVGKEAMLQKRRELLQAQNSRPFGGEEADLEARDGEEAAG
Sequences:
>Translated_123_residues MAENRTGAFIGGLLLGTAVGTAIGLLLAPRSGRETRRLLKKSAEALPEVAEDVTSSLQYQSEKLFDAAQRSLDEALLRLQ QAVAVGKEAMLQKRRELLQAQNSRPFGGEEADLEARDGEEAAG >Mature_122_residues AENRTGAFIGGLLLGTAVGTAIGLLLAPRSGRETRRLLKKSAEALPEVAEDVTSSLQYQSEKLFDAAQRSLDEALLRLQQ AVAVGKEAMLQKRRELLQAQNSRPFGGEEADLEARDGEEAAG
Specific function: Unknown
COG id: COG4980
COG function: function code R; Gas vesicle protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13194; Mature: 13063
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAENRTGAFIGGLLLGTAVGTAIGLLLAPRSGRETRRLLKKSAEALPEVAEDVTSSLQYQ CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SEKLFDAAQRSLDEALLRLQQAVAVGKEAMLQKRRELLQAQNSRPFGGEEADLEARDGEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC AAG CCC >Mature Secondary Structure AENRTGAFIGGLLLGTAVGTAIGLLLAPRSGRETRRLLKKSAEALPEVAEDVTSSLQYQ CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SEKLFDAAQRSLDEALLRLQQAVAVGKEAMLQKRRELLQAQNSRPFGGEEADLEARDGEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC AAG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA