| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609667
Identifier: 86609667
GI number: 86609667
Start: 2327106
End: 2327495
Strand: Direct
Name: 86609667
Synonym: CYB_2223
Alternate gene names: NA
Gene position: 2327106-2327495 (Clockwise)
Preceding gene: 86609666
Following gene: 86609668
Centisome position: 76.38
GC content: 55.13
Gene sequence:
>390_bases GTGGCTGGTCACTATCCACTCACCACTATCCAGGGTAAGGGTCGGGATAAAAGGCGAGGACACGATGCTGTTCGGATAAT TCAGCACCGTCCTTTGCCTGAGGGCTTTGTGATTAAGACCGCTGCCATCAGCCGCAAGGCAGACGGGTGGTATGTGACCT TGAGCCTGCAAGATTCGTCCGTCCCTGAGTTTACTCCTGAGTCTGCAACGCTGGAAAACACTACAGGGATCGACGTGGGA CTGGACTCCTTTTTGGTGACCGACGCGGGGGAGTCTGTTCCAGTTCCCCAGTATTACCGCAGAGCCCAAAAGCGGTTAAA GAGACTGCAGCGGGCAGTGTCTCGCGAGAAGAAGGGGTCAAACCGCCTATGGCTAGTGACTAGTGGATAG
Upstream 100 bases:
>100_bases GATGGAGGGGCTGAGGCGCAGCCAGGGGGCCATTTTCGATCTTTGGGGATTGGCTTTGTTAGCTAGACCGGCGGGAAGCC CCGCCTTCTGTTAGTGACTA
Downstream 100 bases:
>100_bases TGACCAGTAGATAGTGAATAGTGACTATCCACTAACCACTATCCACTAACCACTATCTCAGCGCAAAGATTTTCATGACA AAACAGCGAACTGGCTGGTA
Product: ISSoc11, transposase orfA, truncation
Products: NA
Alternate protein names: ISSoc11 Transposase OrfA Truncation; ISSoc3 OrfB Transposase; ISSoc11 Transposase OrfA; ISSoc5 Transposase; ISSoc10 OrfB Transposase
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MAGHYPLTTIQGKGRDKRRGHDAVRIIQHRPLPEGFVIKTAAISRKADGWYVTLSLQDSSVPEFTPESATLENTTGIDVG LDSFLVTDAGESVPVPQYYRRAQKRLKRLQRAVSREKKGSNRLWLVTSG
Sequences:
>Translated_129_residues MAGHYPLTTIQGKGRDKRRGHDAVRIIQHRPLPEGFVIKTAAISRKADGWYVTLSLQDSSVPEFTPESATLENTTGIDVG LDSFLVTDAGESVPVPQYYRRAQKRLKRLQRAVSREKKGSNRLWLVTSG >Mature_128_residues AGHYPLTTIQGKGRDKRRGHDAVRIIQHRPLPEGFVIKTAAISRKADGWYVTLSLQDSSVPEFTPESATLENTTGIDVGL DSFLVTDAGESVPVPQYYRRAQKRLKRLQRAVSREKKGSNRLWLVTSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14405; Mature: 14273
Theoretical pI: Translated: 10.71; Mature: 10.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGHYPLTTIQGKGRDKRRGHDAVRIIQHRPLPEGFVIKTAAISRKADGWYVTLSLQDSS CCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCEEEEEEHHCCCCCCEEEEEEECCCC VPEFTPESATLENTTGIDVGLDSFLVTDAGESVPVPQYYRRAQKRLKRLQRAVSREKKGS CCCCCCCCCCCCCCCCCEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC NRLWLVTSG CEEEEEECC >Mature Secondary Structure AGHYPLTTIQGKGRDKRRGHDAVRIIQHRPLPEGFVIKTAAISRKADGWYVTLSLQDSS CCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCEEEEEEHHCCCCCCEEEEEEECCCC VPEFTPESATLENTTGIDVGLDSFLVTDAGESVPVPQYYRRAQKRLKRLQRAVSREKKGS CCCCCCCCCCCCCCCCCEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC NRLWLVTSG CEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA