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The map label for this gene is atpC

Identifier: 86609666

GI number: 86609666

Start: 2326545

End: 2326958

Strand: Direct

Name: atpC

Synonym: CYB_2222

Alternate gene names: 86609666

Gene position: 2326545-2326958 (Clockwise)

Preceding gene: 86609663

Following gene: 86609667

Centisome position: 76.36

GC content: 57.49

Gene sequence:

>414_bases
GTGACGCTGATGGTTCGTGTGATTACCCCCGACCGCACGGTTTGGGATGCCCCCAGCGAGGAAGTGATCCTCCCTGCCAC
TTCGGGCCAATTGGGCATTCTCACTGGGCACGCCCCCCTCTTGACCGCCATCGGCAATGGCGTTATGCGGGTCAAAGCCG
ATGGAAAGTGGTTGGCCATTGCGGTCATGGGCGGATTTGCAGAAGTCGAAAATAACGAGGTAACCGTCCTGGTCAACCGA
GCAGAGCGGGGTGAAAAAGTGGATAAGGCAGCGGCTCAGGCCCTCTTGGACGAAGCAAGCAAAGTTTTGAATACCAGCAG
CGACAAGCAAGAGCGCTTGCAAGCCAAGTTGGATCAACAGCGAGCCAGGGCCTTGATCCAAGCTGCCGAGATGGGCAGCA
AGACTGGAAGCTGA

Upstream 100 bases:

>100_bases
GGAACCAGGCAAAGCTGCAGGGATCCTAATCCGCTAGGATCGAAACCAGGGTGCTCCGCACCGTCGACGCGAAAGTGCTC
AAGCTTTCAGGAGATCTGTC

Downstream 100 bases:

>100_bases
CCCTGTCCCGGCGCGGGATCTGCAGATGGAGCTCAAGCTGCAGGAGAGATGGAGGGGCTGAGGCGCAGCCAGGGGGCCAT
TTTCGATCTTTGGGGATTGG

Product: F0F1 ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MTLMVRVITPDRTVWDAPSEEVILPATSGQLGILTGHAPLLTAIGNGVMRVKADGKWLAIAVMGGFAEVENNEVTVLVNR
AERGEKVDKAAAQALLDEASKVLNTSSDKQERLQAKLDQQRARALIQAAEMGSKTGS

Sequences:

>Translated_137_residues
MTLMVRVITPDRTVWDAPSEEVILPATSGQLGILTGHAPLLTAIGNGVMRVKADGKWLAIAVMGGFAEVENNEVTVLVNR
AERGEKVDKAAAQALLDEASKVLNTSSDKQERLQAKLDQQRARALIQAAEMGSKTGS
>Mature_136_residues
TLMVRVITPDRTVWDAPSEEVILPATSGQLGILTGHAPLLTAIGNGVMRVKADGKWLAIAVMGGFAEVENNEVTVLVNRA
ERGEKVDKAAAQALLDEASKVLNTSSDKQERLQAKLDQQRARALIQAAEMGSKTGS

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=135, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_SYNJB (Q2JJK2)

Other databases:

- EMBL:   CP000240
- RefSeq:   YP_478428.1
- ProteinModelPortal:   Q2JJK2
- SMR:   Q2JJK2
- STRING:   Q2JJK2
- GeneID:   3900024
- GenomeReviews:   CP000240_GR
- KEGG:   cyb:CYB_2222
- TIGR:   CYB_2222
- eggNOG:   COG0355
- HOGENOM:   HBG663981
- OMA:   NNAEIGS
- PhylomeDB:   Q2JJK2
- ProtClustDB:   PRK00571
- BioCyc:   SSP321332:CYB_2222-MONOMER
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020546
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF02823 ATP-synt_DE_N; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 14608; Mature: 14477

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLMVRVITPDRTVWDAPSEEVILPATSGQLGILTGHAPLLTAIGNGVMRVKADGKWLAI
CEEEEEEECCCCEECCCCCCCEEEEECCCCEEEEECCCHHHHHHCCCEEEEEECCCEEEE
AVMGGFAEVENNEVTVLVNRAERGEKVDKAAAQALLDEASKVLNTSSDKQERLQAKLDQQ
EEECCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
RARALIQAAEMGSKTGS
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TLMVRVITPDRTVWDAPSEEVILPATSGQLGILTGHAPLLTAIGNGVMRVKADGKWLAI
EEEEEEECCCCEECCCCCCCEEEEECCCCEEEEECCCHHHHHHCCCEEEEEECCCEEEE
AVMGGFAEVENNEVTVLVNRAERGEKVDKAAAQALLDEASKVLNTSSDKQERLQAKLDQQ
EEECCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
RARALIQAAEMGSKTGS
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA