| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is cobI [H]
Identifier: 86609635
GI number: 86609635
Start: 2293808
End: 2294563
Strand: Reverse
Name: cobI [H]
Synonym: CYB_2189
Alternate gene names: 86609635
Gene position: 2294563-2293808 (Counterclockwise)
Preceding gene: 86609636
Following gene: 86609634
Centisome position: 75.31
GC content: 61.9
Gene sequence:
>756_bases ATGGGTCTGGGAACCTTTTGGGGGATCAGTGCTGGAGCAGGGGATCCCGACTGGATCACGGTCAAAGCAGCCCGCATCCT CAGCACGGTCAACTGGGTGGCCTGTCCCCAAAATGCCGCCGGCCAGCCGGGCCTGGCCTATCAGATTGTGCGCCCTTGGC TGCGACCGGAACAAACCCTCTTGCCGCTTCGCCTGCCCTTTGTCACCCGGTCGGAAGTCCTGCAAGCTGCCTGGCAAGCG GCTGCCCAGCAACTGGCCCCACTCCTAGAAAGGGGAGAAGATGTCGCCTTCATCTGTGAGGGAGACGTGGGCCTCTACAG CACCTTTGCCTACGTGGCCCAAGCCCTGCGGCAGCGGATCCCCGCCTTGCCCATCCAGGCCATACCGGGGGTGTGCTCTC CCTTAGCCGCTGCTGCTGCCCTGGGATCCCCCTTGGTGCTCGGCTCCGAGAAATTGGCGATTTTACCGGCTCTGTTTGCC CTCTCGGAACTGGAGCAGGCTTGTGCCTGGGCTGAGGTAGTCGTCCTCATGAAAGTGGCCTCTGTCTACCCTCAGGTTTG GCAGTGGCTGGCCGAAAGAGGTTGGCTGCAACAGGCCAGCTTGGTGGTCTGGGCCGGCTGGCCTCAGCAAACCCTCTTCC CCACCCTGGAAGGACTGGCCGACTACCGGCCCCCCTACTTTTCCCTGCTGATCCTGCGTTCTCGGCCCCGAAATCAAGAT TCTCTTAACCTGGAAAACGAGCTACAGCTGGAATGA
Upstream 100 bases:
>100_bases GGAGAAGTTCCTATCTTTGCGCAACTCCTTGCAGGAAGCCTTGGATCGCCTGAAGGAAGGAAGTACGGGCAGTACAGAGA CCGCCTGATACGTAATAAGT
Downstream 100 bases:
>100_bases GTTTTCTAGGATAGGGAATGAGTTCCTTCCGGCGATTAAGCCCGAAGCAGGGGTTGGTCGTTGTTTTTTTGCGTTTATTT CTGTTTAGCTCAAGGCTCGC
Product: precorrin-2 methyltransferase
Products: NA
Alternate protein names: S-adenosyl-L-methionine--precorrin-2 methyltransferase; SP2MT [H]
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MGLGTFWGISAGAGDPDWITVKAARILSTVNWVACPQNAAGQPGLAYQIVRPWLRPEQTLLPLRLPFVTRSEVLQAAWQA AAQQLAPLLERGEDVAFICEGDVGLYSTFAYVAQALRQRIPALPIQAIPGVCSPLAAAAALGSPLVLGSEKLAILPALFA LSELEQACAWAEVVVLMKVASVYPQVWQWLAERGWLQQASLVVWAGWPQQTLFPTLEGLADYRPPYFSLLILRSRPRNQD SLNLENELQLE
Sequences:
>Translated_251_residues MGLGTFWGISAGAGDPDWITVKAARILSTVNWVACPQNAAGQPGLAYQIVRPWLRPEQTLLPLRLPFVTRSEVLQAAWQA AAQQLAPLLERGEDVAFICEGDVGLYSTFAYVAQALRQRIPALPIQAIPGVCSPLAAAAALGSPLVLGSEKLAILPALFA LSELEQACAWAEVVVLMKVASVYPQVWQWLAERGWLQQASLVVWAGWPQQTLFPTLEGLADYRPPYFSLLILRSRPRNQD SLNLENELQLE >Mature_250_residues GLGTFWGISAGAGDPDWITVKAARILSTVNWVACPQNAAGQPGLAYQIVRPWLRPEQTLLPLRLPFVTRSEVLQAAWQAA AQQLAPLLERGEDVAFICEGDVGLYSTFAYVAQALRQRIPALPIQAIPGVCSPLAAAAALGSPLVLGSEKLAILPALFAL SELEQACAWAEVVVLMKVASVYPQVWQWLAERGWLQQASLVVWAGWPQQTLFPTLEGLADYRPPYFSLLILRSRPRNQDS LNLENELQLE
Specific function: Methylates precorrin-2 at the C-20 position to produce precorrin-3A [H]
COG id: COG2243
COG function: function code H; Precorrin-2 methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR012382 - InterPro: IPR006364 [H]
Pfam domain/function: PF00590 TP_methylase [H]
EC number: =2.1.1.130 [H]
Molecular weight: Translated: 27467; Mature: 27336
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLGTFWGISAGAGDPDWITVKAARILSTVNWVACPQNAAGQPGLAYQIVRPWLRPEQTL CCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCE LPLRLPFVTRSEVLQAAWQAAAQQLAPLLERGEDVAFICEGDVGLYSTFAYVAQALRQRI EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHC PALPIQAIPGVCSPLAAAAALGSPLVLGSEKLAILPALFALSELEQACAWAEVVVLMKVA CCCCHHHCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVYPQVWQWLAERGWLQQASLVVWAGWPQQTLFPTLEGLADYRPPYFSLLILRSRPRNQD HHHHHHHHHHHHHCCHHHCCEEEEECCCCHHHHHHHHHHHHCCCCHHEEEEECCCCCCCC SLNLENELQLE CCCCCCCCCCC >Mature Secondary Structure GLGTFWGISAGAGDPDWITVKAARILSTVNWVACPQNAAGQPGLAYQIVRPWLRPEQTL CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCE LPLRLPFVTRSEVLQAAWQAAAQQLAPLLERGEDVAFICEGDVGLYSTFAYVAQALRQRI EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHC PALPIQAIPGVCSPLAAAAALGSPLVLGSEKLAILPALFALSELEQACAWAEVVVLMKVA CCCCHHHCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVYPQVWQWLAERGWLQQASLVVWAGWPQQTLFPTLEGLADYRPPYFSLLILRSRPRNQD HHHHHHHHHHHHHCCHHHCCEEEEECCCCHHHHHHHHHHHHCCCCHHEEEEECCCCCCCC SLNLENELQLE CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]