| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is bcp [H]
Identifier: 86609632
GI number: 86609632
Start: 2291356
End: 2291877
Strand: Reverse
Name: bcp [H]
Synonym: CYB_2186
Alternate gene names: 86609632
Gene position: 2291877-2291356 (Counterclockwise)
Preceding gene: 86609633
Following gene: 86609630
Centisome position: 75.23
GC content: 59.96
Gene sequence:
>522_bases ATGGGATTGGTTGTGGGCCTGCTTGTGGGCTTTGGGATGACTCAGCCTGCCTGGGCCCAGTGGGGAACTACTCCTCTCCC GCCAATAGGTTCTCCGGCACCGGAGTTCGCATTGCCGGATCAATCCGGGCAAATACGGCGGCTGGCGGATTTTCGGGGGG AGTGGGTGGTGTTGTATTTTTACCCCCGCGACTTCACTTCCGGCTGTACGATTGAGGCCCGCCGCTTTCAGCAAGATTTG CCCAAGTTCCGGGCCATGGGGGCACAGGTTGTGGGCGTGAGCGCTGACTCGGTGGACTCTCACAGGCGCTTTTGCTCGGC AGAGGGGCTACAGTTTCCTTTGCTGTCGGATCCCGACGGCACGGTCAGTCGAGCCTACGGATCCTGGATGGGCGATGTTG CCCTGCGCAATACGTTCTTGATCGACCCGGAGGGGATTTTGCGAGAAATCGACCCAATCGTGAACCCCAGCCGCCACAGC GCTGAGGTTCTGGCCCAGTTGCAGCAGCTTATCAGGAACTAG
Upstream 100 bases:
>100_bases GCAGTGAGGCGAGTTCCTGGACTCATATAAAGTTATGTAAACTAGAGATGGGTTCTAGAGAGGTCTCGGAGGGGCAGTGA GGGAATTGGGCAGGGTTTTC
Downstream 100 bases:
>100_bases CCCTCTAGCTTTCCGGGCCAAAAGTCTGCTCAAACTCGTGGAGCAACTCGTCGATCTCCTCCAGCGCTTGGTTGACATCC ACGCGCAAGCTGCCCAAGTC
Product: peroxiredoxin
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MGLVVGLLVGFGMTQPAWAQWGTTPLPPIGSPAPEFALPDQSGQIRRLADFRGEWVVLYFYPRDFTSGCTIEARRFQQDL PKFRAMGAQVVGVSADSVDSHRRFCSAEGLQFPLLSDPDGTVSRAYGSWMGDVALRNTFLIDPEGILREIDPIVNPSRHS AEVLAQLQQLIRN
Sequences:
>Translated_173_residues MGLVVGLLVGFGMTQPAWAQWGTTPLPPIGSPAPEFALPDQSGQIRRLADFRGEWVVLYFYPRDFTSGCTIEARRFQQDL PKFRAMGAQVVGVSADSVDSHRRFCSAEGLQFPLLSDPDGTVSRAYGSWMGDVALRNTFLIDPEGILREIDPIVNPSRHS AEVLAQLQQLIRN >Mature_172_residues GLVVGLLVGFGMTQPAWAQWGTTPLPPIGSPAPEFALPDQSGQIRRLADFRGEWVVLYFYPRDFTSGCTIEARRFQQDLP KFRAMGAQVVGVSADSVDSHRRFCSAEGLQFPLLSDPDGTVSRAYGSWMGDVALRNTFLIDPEGILREIDPIVNPSRHSA EVLAQLQQLIRN
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI4505591, Length=135, Percent_Identity=36.2962962962963, Blast_Score=86, Evalue=1e-17, Organism=Homo sapiens, GI32455266, Length=135, Percent_Identity=36.2962962962963, Blast_Score=86, Evalue=1e-17, Organism=Homo sapiens, GI32455264, Length=135, Percent_Identity=36.2962962962963, Blast_Score=86, Evalue=1e-17, Organism=Homo sapiens, GI32189392, Length=134, Percent_Identity=39.5522388059701, Blast_Score=86, Evalue=1e-17, Organism=Homo sapiens, GI5453549, Length=134, Percent_Identity=37.3134328358209, Blast_Score=80, Evalue=8e-16, Organism=Homo sapiens, GI5802974, Length=136, Percent_Identity=33.8235294117647, Blast_Score=74, Evalue=7e-14, Organism=Homo sapiens, GI32483377, Length=120, Percent_Identity=35, Blast_Score=73, Evalue=1e-13, Organism=Homo sapiens, GI33188454, Length=76, Percent_Identity=43.421052631579, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1788825, Length=148, Percent_Identity=37.1621621621622, Blast_Score=101, Evalue=3e-23, Organism=Escherichia coli, GI1786822, Length=108, Percent_Identity=30.5555555555556, Blast_Score=65, Evalue=3e-12, Organism=Caenorhabditis elegans, GI32565831, Length=134, Percent_Identity=37.3134328358209, Blast_Score=82, Evalue=1e-16, Organism=Caenorhabditis elegans, GI193204376, Length=134, Percent_Identity=37.3134328358209, Blast_Score=82, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17554494, Length=138, Percent_Identity=32.6086956521739, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6323613, Length=112, Percent_Identity=38.3928571428571, Blast_Score=69, Evalue=5e-13, Organism=Drosophila melanogaster, GI17738015, Length=141, Percent_Identity=39.0070921985816, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI24656348, Length=134, Percent_Identity=35.0746268656716, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI17864676, Length=134, Percent_Identity=35.0746268656716, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI17157991, Length=156, Percent_Identity=31.4102564102564, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI24641739, Length=156, Percent_Identity=31.4102564102564, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI21357347, Length=134, Percent_Identity=37.3134328358209, Blast_Score=73, Evalue=9e-14,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 19104; Mature: 18973
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLVVGLLVGFGMTQPAWAQWGTTPLPPIGSPAPEFALPDQSGQIRRLADFRGEWVVLYF CHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEE YPRDFTSGCTIEARRFQQDLPKFRAMGAQVVGVSADSVDSHRRFCSAEGLQFPLLSDPDG ECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCC TVSRAYGSWMGDVALRNTFLIDPEGILREIDPIVNPSRHSAEVLAQLQQLIRN HHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure GLVVGLLVGFGMTQPAWAQWGTTPLPPIGSPAPEFALPDQSGQIRRLADFRGEWVVLYF HHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEE YPRDFTSGCTIEARRFQQDLPKFRAMGAQVVGVSADSVDSHRRFCSAEGLQFPLLSDPDG ECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCC TVSRAYGSWMGDVALRNTFLIDPEGILREIDPIVNPSRHSAEVLAQLQQLIRN HHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]