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The map label for this gene is yhdW [H]

Identifier: 86609630

GI number: 86609630

Start: 2290064

End: 2290804

Strand: Reverse

Name: yhdW [H]

Synonym: CYB_2183

Alternate gene names: 86609630

Gene position: 2290804-2290064 (Counterclockwise)

Preceding gene: 86609632

Following gene: 86609628

Centisome position: 75.19

GC content: 53.98

Gene sequence:

>741_bases
ATGCTCCCCTACACCCAGATTGTCGCCCACCGTGGGGAGCACACCCACGCCGAGGAAAACACGTTGGCCGCTTTTGCTGC
TGCTGTTGAAGTGGGGGCCGAGCAAATTGAGCTGGATGTGCGCTGTAGCCGAGATGGGATCCCACTGGTTGTTCACGATG
CCGATTTGGATGGACAGCCTTTGGCCGCATTAACTTGGGCCGAGATTCGGGCCCGCAAACCCACGATTCCCACTCTTGAA
GAGACCCTGTCACATATCAAGGGCAAGATCACCCTCGATATCGAACTCAAAGAAGCAGGCTATGAGGAACAAGTCCTTGC
CCTCGTTAGCGATATTTTGACCCCCGAAGAATTTGTGATCACCTCTTTTTTGCCTCAGGTGGTGCAGCGGGTTAAAACGC
TTTTGTCCCCGCAACCCAAGGTTGGCCTGTTGATCGAGGCAAAGGCTGAGGAGCAAGCCAAGGGATCTTTACTTACCCGT
TGCCGGGAGTTGGGAGCGGATTTTCTGGCCTCCCACTACAGTTGGGTGAACTTGCAGTTCTTGGCTGAAGCTGAACAGGC
CGGGATCCCTCTGTACGTTTGGACGGTGAACGATCCTGAAGTGATGAAGTTGTGCTTGCAGCCATTTGCCGGCTCAGTAG
GACAAAATCCCGTTGTTCAAGGGTTGATTACCGACCGTCCCCAATTGGCTTTGCAAATTCGCGCCCACCTTTTGGCAGAA
ATAGAGGGGGCAAAACCCTAG

Upstream 100 bases:

>100_bases
CCACCCCAGAGGCTCGTGGTTGGCTTGCTAACTGCAGGGCTACTAAAAGCCCGCTCCGTACCGCCTAGCGGTTGGTGTCG
GGTAGTTTACAGGTGCTGAC

Downstream 100 bases:

>100_bases
ACCATGGGCACAAACTGCACTGGAAAAGCCCCTTTTTGAACCCATCCTTGGGCTGTTTTGCAGAGGATCAGCAAGGACTG
GGATCCCTGGGCACCGGAGT

Product: glycerophosphoryl diester phosphodiesterase family protein

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MLPYTQIVAHRGEHTHAEENTLAAFAAAVEVGAEQIELDVRCSRDGIPLVVHDADLDGQPLAALTWAEIRARKPTIPTLE
ETLSHIKGKITLDIELKEAGYEEQVLALVSDILTPEEFVITSFLPQVVQRVKTLLSPQPKVGLLIEAKAEEQAKGSLLTR
CRELGADFLASHYSWVNLQFLAEAEQAGIPLYVWTVNDPEVMKLCLQPFAGSVGQNPVVQGLITDRPQLALQIRAHLLAE
IEGAKP

Sequences:

>Translated_246_residues
MLPYTQIVAHRGEHTHAEENTLAAFAAAVEVGAEQIELDVRCSRDGIPLVVHDADLDGQPLAALTWAEIRARKPTIPTLE
ETLSHIKGKITLDIELKEAGYEEQVLALVSDILTPEEFVITSFLPQVVQRVKTLLSPQPKVGLLIEAKAEEQAKGSLLTR
CRELGADFLASHYSWVNLQFLAEAEQAGIPLYVWTVNDPEVMKLCLQPFAGSVGQNPVVQGLITDRPQLALQIRAHLLAE
IEGAKP
>Mature_246_residues
MLPYTQIVAHRGEHTHAEENTLAAFAAAVEVGAEQIELDVRCSRDGIPLVVHDADLDGQPLAALTWAEIRARKPTIPTLE
ETLSHIKGKITLDIELKEAGYEEQVLALVSDILTPEEFVITSFLPQVVQRVKTLLSPQPKVGLLIEAKAEEQAKGSLLTR
CRELGADFLASHYSWVNLQFLAEAEQAGIPLYVWTVNDPEVMKLCLQPFAGSVGQNPVVQGLITDRPQLALQIRAHLLAE
IEGAKP

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to sn-glycerol 3-phosphate (G3P) and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GDPD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 26975; Mature: 26975

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPYTQIVAHRGEHTHAEENTLAAFAAAVEVGAEQIELDVRCSRDGIPLVVHDADLDGQP
CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHEEEEEEECCCCCEEEEECCCCCCCC
LAALTWAEIRARKPTIPTLEETLSHIKGKITLDIELKEAGYEEQVLALVSDILTPEEFVI
CCEEHHHHHHCCCCCCCCHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHCCCHHHHH
TSFLPQVVQRVKTLLSPQPKVGLLIEAKAEEQAKGSLLTRCRELGADFLASHYSWVNLQF
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHCHHHHHHCCCEEEEEE
LAEAEQAGIPLYVWTVNDPEVMKLCLQPFAGSVGQNPVVQGLITDRPQLALQIRAHLLAE
EEHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEEHEECCCHHHHHHHHHHHHHH
IEGAKP
HCCCCC
>Mature Secondary Structure
MLPYTQIVAHRGEHTHAEENTLAAFAAAVEVGAEQIELDVRCSRDGIPLVVHDADLDGQP
CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHEEEEEEECCCCCEEEEECCCCCCCC
LAALTWAEIRARKPTIPTLEETLSHIKGKITLDIELKEAGYEEQVLALVSDILTPEEFVI
CCEEHHHHHHCCCCCCCCHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHCCCHHHHH
TSFLPQVVQRVKTLLSPQPKVGLLIEAKAEEQAKGSLLTRCRELGADFLASHYSWVNLQF
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHCHHHHHHCCCEEEEEE
LAEAEQAGIPLYVWTVNDPEVMKLCLQPFAGSVGQNPVVQGLITDRPQLALQIRAHLLAE
EEHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEEHEECCCHHHHHHHHHHHHHH
IEGAKP
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]