| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is suhB [H]
Identifier: 86609617
GI number: 86609617
Start: 2273704
End: 2274516
Strand: Reverse
Name: suhB [H]
Synonym: CYB_2170
Alternate gene names: 86609617
Gene position: 2274516-2273704 (Counterclockwise)
Preceding gene: 86609620
Following gene: 86609616
Centisome position: 74.66
GC content: 59.9
Gene sequence:
>813_bases TTGGATGTGGCCACAGAAGCTGCCCTGGAGGCAGGGGCTTTGCTGCGCAGTTATGTGGGAGGCACCCTTGCCATTGAGGA GAAACGTCCGGGCGACTTGGTGACGGCGGCGGATCGCGCTTCCGAGGATCTCATCTTAAAAATCTTGAGGCGGCACTTCC CCGAAGATGTCATCTTGACCGAGGAATCAGGCCAGCAGGGATCCCCGGAGGGTGCCTACGCTTGGATGATCGATCCCCTA GATGGCACCACCAACTTTGCCCATGGCTACCCTTTTGCCGCCGTCTCCATTGGTTTGCTGCAGGGGCGGGAGCCGGTTTT GGGGGTTGTTTGTGATGTTTTTCGCGGGGATCTGTTTCGCGCCGTCCAAGGAATGGGGGCCACCCGCAACCGTCAACCCA TTCGAGTCTCCACAACGGCTGAATTGTCTCGGAGCCTGCTGGTTACCGGCTTTGCCTACGATCGTCGCGAAACCCCCGAC AACAACTACGCCGAGTTTTGCCACTTTACCCATCTCACCCAAGGAGTGCGGCGCGGCGGATCTGCAGCTCTGGATTTGGC CTATGTGGCCACCGGCCAGTTGGATGGCTATTGGGAGCGGGGCCTCTCCCCTTGGGACATTGCCGCAGGGATCGTTCTGG TGCGGGAGGCAGGCGGCAAGGTGACCGCTTATGATGGCAGCCCGGTGGACGTTTACAGTGGCCGACTGTTGGCCAGCAAT GGCTGGTTACACGCTGCTCTGCAAGAAGAATTGGCCCAAGTACAGCCTTTGCCGGTCTCCTTTCCCATGCGGCGGGATCC CCACCCAACCTAG
Upstream 100 bases:
>100_bases TTTCAGGGATCCCTTGGGAGCCACAGCCTCAGGCGGGCTATTCTGAGTAGCAGGTTTTTAACCTTGAGGTGAGGGTGTGA CAGAGGCCCTGCTGCGTCGG
Downstream 100 bases:
>100_bases AAAAACCGGGAAAGCTTGCCGGTTGAAAGAGTTGAATTCGAGACAGAAGTAGTTGAAGAATAATCAAGAAGACTACAAAA CATCCGTGTCGGGCAGGGTA
Product: inositol monophosphatase family protein
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MDVATEAALEAGALLRSYVGGTLAIEEKRPGDLVTAADRASEDLILKILRRHFPEDVILTEESGQQGSPEGAYAWMIDPL DGTTNFAHGYPFAAVSIGLLQGREPVLGVVCDVFRGDLFRAVQGMGATRNRQPIRVSTTAELSRSLLVTGFAYDRRETPD NNYAEFCHFTHLTQGVRRGGSAALDLAYVATGQLDGYWERGLSPWDIAAGIVLVREAGGKVTAYDGSPVDVYSGRLLASN GWLHAALQEELAQVQPLPVSFPMRRDPHPT
Sequences:
>Translated_270_residues MDVATEAALEAGALLRSYVGGTLAIEEKRPGDLVTAADRASEDLILKILRRHFPEDVILTEESGQQGSPEGAYAWMIDPL DGTTNFAHGYPFAAVSIGLLQGREPVLGVVCDVFRGDLFRAVQGMGATRNRQPIRVSTTAELSRSLLVTGFAYDRRETPD NNYAEFCHFTHLTQGVRRGGSAALDLAYVATGQLDGYWERGLSPWDIAAGIVLVREAGGKVTAYDGSPVDVYSGRLLASN GWLHAALQEELAQVQPLPVSFPMRRDPHPT >Mature_270_residues MDVATEAALEAGALLRSYVGGTLAIEEKRPGDLVTAADRASEDLILKILRRHFPEDVILTEESGQQGSPEGAYAWMIDPL DGTTNFAHGYPFAAVSIGLLQGREPVLGVVCDVFRGDLFRAVQGMGATRNRQPIRVSTTAELSRSLLVTGFAYDRRETPD NNYAEFCHFTHLTQGVRRGGSAALDLAYVATGQLDGYWERGLSPWDIAAGIVLVREAGGKVTAYDGSPVDVYSGRLLASN GWLHAALQEELAQVQPLPVSFPMRRDPHPT
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=266, Percent_Identity=35.3383458646617, Blast_Score=158, Evalue=5e-39, Organism=Homo sapiens, GI221625487, Length=266, Percent_Identity=35.3383458646617, Blast_Score=157, Evalue=7e-39, Organism=Homo sapiens, GI7657236, Length=250, Percent_Identity=36, Blast_Score=138, Evalue=5e-33, Organism=Homo sapiens, GI221625507, Length=158, Percent_Identity=33.5443037974684, Blast_Score=92, Evalue=6e-19, Organism=Escherichia coli, GI1788882, Length=243, Percent_Identity=40.7407407407407, Blast_Score=167, Evalue=6e-43, Organism=Caenorhabditis elegans, GI193202572, Length=247, Percent_Identity=34.0080971659919, Blast_Score=131, Evalue=4e-31, Organism=Caenorhabditis elegans, GI193202570, Length=250, Percent_Identity=34, Blast_Score=129, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6320493, Length=224, Percent_Identity=37.0535714285714, Blast_Score=132, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6321836, Length=272, Percent_Identity=30.1470588235294, Blast_Score=114, Evalue=1e-26, Organism=Drosophila melanogaster, GI24664922, Length=239, Percent_Identity=37.2384937238494, Blast_Score=142, Evalue=3e-34, Organism=Drosophila melanogaster, GI21357329, Length=265, Percent_Identity=35.8490566037736, Blast_Score=141, Evalue=6e-34, Organism=Drosophila melanogaster, GI24664926, Length=227, Percent_Identity=35.2422907488987, Blast_Score=128, Evalue=3e-30, Organism=Drosophila melanogaster, GI21357303, Length=239, Percent_Identity=30.5439330543933, Blast_Score=114, Evalue=6e-26, Organism=Drosophila melanogaster, GI24664918, Length=245, Percent_Identity=33.0612244897959, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI21357957, Length=216, Percent_Identity=33.7962962962963, Blast_Score=110, Evalue=9e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 29254; Mature: 29254
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVATEAALEAGALLRSYVGGTLAIEEKRPGDLVTAADRASEDLILKILRRHFPEDVILT CCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEECCHHCCHHHHHHHHHHHCCCCEEEE EESGQQGSPEGAYAWMIDPLDGTTNFAHGYPFAAVSIGLLQGREPVLGVVCDVFRGDLFR CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AVQGMGATRNRQPIRVSTTAELSRSLLVTGFAYDRRETPDNNYAEFCHFTHLTQGVRRGG HHHCCCCCCCCCCEEEEHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC SAALDLAYVATGQLDGYWERGLSPWDIAAGIVLVREAGGKVTAYDGSPVDVYSGRLLASN CCEEEEEEEEECCCCHHHHHCCCHHHHHHCEEEEEECCCEEEEECCCCCEEECCEEEECC GWLHAALQEELAQVQPLPVSFPMRRDPHPT CCCHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDVATEAALEAGALLRSYVGGTLAIEEKRPGDLVTAADRASEDLILKILRRHFPEDVILT CCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEECCHHCCHHHHHHHHHHHCCCCEEEE EESGQQGSPEGAYAWMIDPLDGTTNFAHGYPFAAVSIGLLQGREPVLGVVCDVFRGDLFR CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AVQGMGATRNRQPIRVSTTAELSRSLLVTGFAYDRRETPDNNYAEFCHFTHLTQGVRRGG HHHCCCCCCCCCCEEEEHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC SAALDLAYVATGQLDGYWERGLSPWDIAAGIVLVREAGGKVTAYDGSPVDVYSGRLLASN CCEEEEEEEEECCCCHHHHHCCCHHHHHHCEEEEEECCCEEEEECCCCCEEECCEEEECC GWLHAALQEELAQVQPLPVSFPMRRDPHPT CCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]