| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is mpg1 [H]
Identifier: 86609570
GI number: 86609570
Start: 2215664
End: 2216611
Strand: Reverse
Name: mpg1 [H]
Synonym: CYB_2123
Alternate gene names: 86609570
Gene position: 2216611-2215664 (Counterclockwise)
Preceding gene: 86609576
Following gene: 86609569
Centisome position: 72.75
GC content: 59.18
Gene sequence:
>948_bases ATGCAAGCGGTGATCTTGGCGGGTGGGAAAGGAACTCGTTTACGGCCCTTTACCTTTTTGCAGCCTAAGCCTTTGTTGCC CCTCCTGGATGTGCCCTTTTTGGAGTGGCTGATCGGGCGCTGCCGCCGAGCCGGCCTGACGGATATTTTGCTCAGCGTGG GTTATCTGGGCCAACAAATTGAGGCTGCTCTGGGAGATGGCGCTGCTTTGGGGGTGAAGCTCCGCTACATTCCCGAAGAG ACGCCTTTGGATACGGCAGGAGCCTTGGTGCTGGCTCAGCCCTATTTCACCGGGGATCCCTTGGTGGTCTTCAATGCCGA CATCCTCACGGATCTGGATTTGCAGGCGTTGATGCAATGTCATGTGCAGAGCAAGGCCATTGCCACCCTCACCCTCGCCC GCGTGGAAGATATCACCGCCTATGGCCTGGTGGAAGTTGGGGAAGGGGGCCAGATCCAATCTTTTCGGGAAAAACCCACC CCTGCAGAAGCCCTCACCCTCACCACCGACACGATCAACGCCGGCACCTATGTCTTGGATCCAGCCATTTTTAAAGACTA CCCCAGTGGGGATCCCCTCAGCTTCGAGCGGCGTGTCTTCCCCGATTTGCTCAGGCAAGGGCACCGGCTGCAAGCTTATC TCCACACAGGCTACTGGCGGGATCTGGGCACGCCGGCCAGCTACTACCACGGCCAACTGGACATTCTCCTGGGTCGAATG ACGGATTTTCCCCTGGAAGATGTGCAGCAACAGGCGCCGGGGATATGGGTGCACAAAACGGCTGAGATCCATCCCAGCGC TCAACTGCACGCCCCCTGCTACATCGGCGCCCACACCCGTTTGGGATCCCAAGCTCAGATTCCGGCAGGCACCATCCTCG GCAGCCACAGCTGGGTAAATGGATCCCTGCAGCCGGGAGCCTACGGGCCGAGAGTCCTGGTAGTGTAG
Upstream 100 bases:
>100_bases GGGTAGCAGAAAACATTTGGCTCGACCCAATGGATCCCCCTTAGCAATTGGGCGGAGAGGATGTCAATATCTTTGGAAGA GAACGGGGTTGAGGGTGGTT
Downstream 100 bases:
>100_bases GTTAAGTGCAAGTTAAGTTCACAACCATCTACGACAAAGCCATCAACAGATGGAGTTACCACAAACTGGGGAACGCTGGG ATCCCTACCTTGCCTCTGTG
Product: nucleotidyl transferase family protein
Products: NA
Alternate protein names: ATP-mannose-1-phosphate guanylyltransferase; GDP-mannose pyrophosphorylase; NDP-hexose pyrophosphorylase [H]
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MQAVILAGGKGTRLRPFTFLQPKPLLPLLDVPFLEWLIGRCRRAGLTDILLSVGYLGQQIEAALGDGAALGVKLRYIPEE TPLDTAGALVLAQPYFTGDPLVVFNADILTDLDLQALMQCHVQSKAIATLTLARVEDITAYGLVEVGEGGQIQSFREKPT PAEALTLTTDTINAGTYVLDPAIFKDYPSGDPLSFERRVFPDLLRQGHRLQAYLHTGYWRDLGTPASYYHGQLDILLGRM TDFPLEDVQQQAPGIWVHKTAEIHPSAQLHAPCYIGAHTRLGSQAQIPAGTILGSHSWVNGSLQPGAYGPRVLVV
Sequences:
>Translated_315_residues MQAVILAGGKGTRLRPFTFLQPKPLLPLLDVPFLEWLIGRCRRAGLTDILLSVGYLGQQIEAALGDGAALGVKLRYIPEE TPLDTAGALVLAQPYFTGDPLVVFNADILTDLDLQALMQCHVQSKAIATLTLARVEDITAYGLVEVGEGGQIQSFREKPT PAEALTLTTDTINAGTYVLDPAIFKDYPSGDPLSFERRVFPDLLRQGHRLQAYLHTGYWRDLGTPASYYHGQLDILLGRM TDFPLEDVQQQAPGIWVHKTAEIHPSAQLHAPCYIGAHTRLGSQAQIPAGTILGSHSWVNGSLQPGAYGPRVLVV >Mature_315_residues MQAVILAGGKGTRLRPFTFLQPKPLLPLLDVPFLEWLIGRCRRAGLTDILLSVGYLGQQIEAALGDGAALGVKLRYIPEE TPLDTAGALVLAQPYFTGDPLVVFNADILTDLDLQALMQCHVQSKAIATLTLARVEDITAYGLVEVGEGGQIQSFREKPT PAEALTLTTDTINAGTYVLDPAIFKDYPSGDPLSFERRVFPDLLRQGHRLQAYLHTGYWRDLGTPASYYHGQLDILLGRM TDFPLEDVQQQAPGIWVHKTAEIHPSAQLHAPCYIGAHTRLGSQAQIPAGTILGSHSWVNGSLQPGAYGPRVLVV
Specific function: Catalyzes The Formation Of Dtdp-Glucose, From Dttp And Glucose 1-Phosphate, As Well As Its Pyrophosphorolysis. [C]
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=323, Percent_Identity=31.5789473684211, Blast_Score=151, Evalue=7e-37, Organism=Homo sapiens, GI11761619, Length=323, Percent_Identity=31.5789473684211, Blast_Score=151, Evalue=9e-37, Organism=Homo sapiens, GI31881779, Length=338, Percent_Identity=27.5147928994083, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI45447090, Length=338, Percent_Identity=27.5147928994083, Blast_Score=106, Evalue=3e-23, Organism=Escherichia coli, GI1788351, Length=233, Percent_Identity=30.9012875536481, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1790224, Length=165, Percent_Identity=29.6969696969697, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787488, Length=271, Percent_Identity=25.0922509225092, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI133931050, Length=323, Percent_Identity=32.8173374613003, Blast_Score=156, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17509979, Length=310, Percent_Identity=29.0322580645161, Blast_Score=104, Evalue=7e-23, Organism=Caenorhabditis elegans, GI17509981, Length=299, Percent_Identity=28.0936454849498, Blast_Score=96, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6320148, Length=310, Percent_Identity=29.0322580645161, Blast_Score=125, Evalue=1e-29, Organism=Drosophila melanogaster, GI21355443, Length=320, Percent_Identity=31.5625, Blast_Score=157, Evalue=6e-39, Organism=Drosophila melanogaster, GI24644084, Length=320, Percent_Identity=31.5625, Blast_Score=157, Evalue=6e-39, Organism=Drosophila melanogaster, GI24653912, Length=201, Percent_Identity=35.8208955223881, Blast_Score=84, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.13 [H]
Molecular weight: Translated: 34269; Mature: 34269
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAVILAGGKGTRLRPFTFLQPKPLLPLLDVPFLEWLIGRCRRAGLTDILLSVGYLGQQI CCEEEEECCCCCEECCEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH EAALGDGAALGVKLRYIPEETPLDTAGALVLAQPYFTGDPLVVFNADILTDLDLQALMQC HHHHCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCEEEEECHHHCCCCHHHHHHH HVQSKAIATLTLARVEDITAYGLVEVGEGGQIQSFREKPTPAEALTLTTDTINAGTYVLD HHCCHHHHEEEHHHHHHHHEEEEEEECCCCCCCHHHCCCCCCCEEEEEECCCCCCEEEEC PAIFKDYPSGDPLSFERRVFPDLLRQGHRLQAYLHTGYWRDLGTPASYYHGQLDILLGRM HHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHCCCCCHHHHCCEEEEEEECC TDFPLEDVQQQAPGIWVHKTAEIHPSAQLHAPCYIGAHTRLGSQAQIPAGTILGSHSWVN CCCCHHHHHHHCCCEEEEEEEEECCCCEECCCEEEECCCCCCCCCCCCCEEEECCCCEEC GSLQPGAYGPRVLVV CCCCCCCCCCEEEEC >Mature Secondary Structure MQAVILAGGKGTRLRPFTFLQPKPLLPLLDVPFLEWLIGRCRRAGLTDILLSVGYLGQQI CCEEEEECCCCCEECCEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH EAALGDGAALGVKLRYIPEETPLDTAGALVLAQPYFTGDPLVVFNADILTDLDLQALMQC HHHHCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCEEEEECHHHCCCCHHHHHHH HVQSKAIATLTLARVEDITAYGLVEVGEGGQIQSFREKPTPAEALTLTTDTINAGTYVLD HHCCHHHHEEEHHHHHHHHEEEEEEECCCCCCCHHHCCCCCCCEEEEEECCCCCCEEEEC PAIFKDYPSGDPLSFERRVFPDLLRQGHRLQAYLHTGYWRDLGTPASYYHGQLDILLGRM HHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHCCCCCHHHHCCEEEEEEECC TDFPLEDVQQQAPGIWVHKTAEIHPSAQLHAPCYIGAHTRLGSQAQIPAGTILGSHSWVN CCCCHHHHHHHCCCEEEEEEEEECCCCEECCCEEEECCCCCCCCCCCCCEEEECCCCEEC GSLQPGAYGPRVLVV CCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8334170 [H]