Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609558

Identifier: 86609558

GI number: 86609558

Start: 2205522

End: 2206241

Strand: Reverse

Name: 86609558

Synonym: CYB_2111

Alternate gene names: NA

Gene position: 2206241-2205522 (Counterclockwise)

Preceding gene: 86609559

Following gene: 86609557

Centisome position: 72.41

GC content: 53.89

Gene sequence:

>720_bases
ATGTATAGGCCGTTACCGGGAAAACCGTTTCTTTACCTATTGCTCTCAATAAGACAATTAATCTCAATAAGACAATTAAT
TAAGATAGAAAGCCTGACTCCAATCCAATTGACCCCAGTCCAATCAAGAGCGAGGATGCAAACCATGAGCACGACTGCAA
CTGCCACCACCGTTGTCCGGGTGCCGATTGTGGATGCCACCCCAGAAAATGTGCAACCCTTCGGCCAACTTATAGGGGAC
GATGTGGCCAATCCTGGGCTGGGGATCCCCTTTTATCAGGGGCGTGTCCTGGAAGGACAGAACATCGACTTTCAATACAC
CGGCAGAGCCGTTATCCGTACGGCTAAGATCCTGCCCGGATATCCACCTGTGCTCTGGCTGGAGCGCCACATGCGTATGA
CCCAGTTGTTTGTCGGCCTGGGGCAAGAGCCGTTCATCATGGTGATGGCTCCTCCCAACCATCCCAAAGCAGCTCCCGAT
CTCGACAAAGTACAAGCCCTGCGATTCCCTGCCGGGCATGGGCTGCTGCTGCACCTCGGCACGTGGCACGATTTCCCCAT
TGCCTGCGAGCGCCCCGTTGTGGTGCTAACCGCCAACTCCGAAGAAGTGGTGGAAGCCCTGGCCAGCATGGAAGATGCCC
ACGAAATGAATCAGGGAGATGTATTCAAAATTTCCCTCCCCCAACGGCTAAAAGCGGAGATCCACCTAGAGCTGGTGTAA

Upstream 100 bases:

>100_bases
CGGCAAATTCGCCACATCATCGAGCGGTGGTTTAACCCGCAAAGCCCTCGAGAAGAACAAAGTTAAGAATTAAAAGTTAA
GAATTAAATAAGAATCAAAG

Downstream 100 bases:

>100_bases
ACTACCCGACATCAACCGCTAGGCGGTACGGAGCGGGCTTTTAGTAGCCCTGCAGTTGGCAAGCCAACCACGAGCCTCTG
GGGTGGTTTACAGCACCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MYRPLPGKPFLYLLLSIRQLISIRQLIKIESLTPIQLTPVQSRARMQTMSTTATATTVVRVPIVDATPENVQPFGQLIGD
DVANPGLGIPFYQGRVLEGQNIDFQYTGRAVIRTAKILPGYPPVLWLERHMRMTQLFVGLGQEPFIMVMAPPNHPKAAPD
LDKVQALRFPAGHGLLLHLGTWHDFPIACERPVVVLTANSEEVVEALASMEDAHEMNQGDVFKISLPQRLKAEIHLELV

Sequences:

>Translated_239_residues
MYRPLPGKPFLYLLLSIRQLISIRQLIKIESLTPIQLTPVQSRARMQTMSTTATATTVVRVPIVDATPENVQPFGQLIGD
DVANPGLGIPFYQGRVLEGQNIDFQYTGRAVIRTAKILPGYPPVLWLERHMRMTQLFVGLGQEPFIMVMAPPNHPKAAPD
LDKVQALRFPAGHGLLLHLGTWHDFPIACERPVVVLTANSEEVVEALASMEDAHEMNQGDVFKISLPQRLKAEIHLELV
>Mature_239_residues
MYRPLPGKPFLYLLLSIRQLISIRQLIKIESLTPIQLTPVQSRARMQTMSTTATATTVVRVPIVDATPENVQPFGQLIGD
DVANPGLGIPFYQGRVLEGQNIDFQYTGRAVIRTAKILPGYPPVLWLERHMRMTQLFVGLGQEPFIMVMAPPNHPKAAPD
LDKVQALRFPAGHGLLLHLGTWHDFPIACERPVVVLTANSEEVVEALASMEDAHEMNQGDVFKISLPQRLKAEIHLELV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26639; Mature: 26639

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRPLPGKPFLYLLLSIRQLISIRQLIKIESLTPIQLTPVQSRARMQTMSTTATATTVVR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCEEEEEEE
VPIVDATPENVQPFGQLIGDDVANPGLGIPFYQGRVLEGQNIDFQYTGRAVIRTAKILPG
EEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEEECCCEEEEEHHHCCC
YPPVLWLERHMRMTQLFVGLGQEPFIMVMAPPNHPKAAPDLDKVQALRFPAGHGLLLHLG
CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEEEC
TWHDFPIACERPVVVLTANSEEVVEALASMEDAHEMNQGDVFKISLPQRLKAEIHLELV
CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEC
>Mature Secondary Structure
MYRPLPGKPFLYLLLSIRQLISIRQLIKIESLTPIQLTPVQSRARMQTMSTTATATTVVR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCEEEEEEE
VPIVDATPENVQPFGQLIGDDVANPGLGIPFYQGRVLEGQNIDFQYTGRAVIRTAKILPG
EEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEEECCCEEEEEHHHCCC
YPPVLWLERHMRMTQLFVGLGQEPFIMVMAPPNHPKAAPDLDKVQALRFPAGHGLLLHLG
CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEEEC
TWHDFPIACERPVVVLTANSEEVVEALASMEDAHEMNQGDVFKISLPQRLKAEIHLELV
CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA