| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is chlM [H]
Identifier: 86609554
GI number: 86609554
Start: 2201189
End: 2201854
Strand: Reverse
Name: chlM [H]
Synonym: CYB_2107
Alternate gene names: 86609554
Gene position: 2201854-2201189 (Counterclockwise)
Preceding gene: 86609556
Following gene: 86609548
Centisome position: 72.27
GC content: 56.76
Gene sequence:
>666_bases ATGCAAGAGAAAACCATTGTCCGCGATTACTTCAACTCCGTTGGCTTCGAGCGCTGGCGGCGCATTTATGGTGAAGAAGA AGTCAATTTCGTCCAAAAAGACATCCGCCTTGGCCATGCTCGCACAGTAGAGACGGTGTTGCAGTGGTTGGGGGATCCCT CGGGTTTACGCATTTGTGATGCCGGATGCGGGGTGGGCAGCCTCAGTTTGCCCTTGGCCACCAGAGGGGCGCAGGTGTTC GCCAGCGACATCTCGGAACAAATGGTGAACGAAGCACGCCGCCGCCAGCAAATGGAGTTGGGATCCACAGACAACCCACA CTTTTGGGTCTCGGATCTGGAGGAATTGACGGGGGAATACGATGTCGTCATCTGCCTCGATGTGATGATCCACTACCCTG AAGCCGAGGCCCTGCGCATGCTAAAACACCTGACCTGCCTGGCCCAGTCCCGCCTGATCTTCAGTTTCGCTCCCAAAACC CCCTGGCTGACGCTGCTGAAGAAAGTGGGAGAGTTCTTCCCCGGCCCCAGCAAAACCACCCGCGCCTATCAACACCGAGA GGCGACCTTGGTGAGCCAATTAACCGAATGGGGCTGGAAAGTGCAGCAGCGACAAACCATTCGCAGCCGCTTCTACTTTG CTTGGCTCCTCGATCTGGTTCGGTGA
Upstream 100 bases:
>100_bases GCTCGGGGTAGAATGAGATGCGCATGGGCGAAGAAATGCCGGGTCTCGACAGAGCAGGGCGTTCCTCTTTTCTCTCGCCG GATCCCTAGCTGGAAGTTCT
Downstream 100 bases:
>100_bases CACTCGATCTGGTTCGTTAAACGGGAATGAAACATTTTCGTCTAGCTCCCCTCTCCCTCTGGCAGCGAGGCTGGGAGTAG GGGCAGCAGCGTGGAATGCT
Product: Mg-protoporphyrin IX methyl transferase
Products: NA
Alternate protein names: Magnesium-protoporphyrin IX methyltransferase [H]
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MQEKTIVRDYFNSVGFERWRRIYGEEEVNFVQKDIRLGHARTVETVLQWLGDPSGLRICDAGCGVGSLSLPLATRGAQVF ASDISEQMVNEARRRQQMELGSTDNPHFWVSDLEELTGEYDVVICLDVMIHYPEAEALRMLKHLTCLAQSRLIFSFAPKT PWLTLLKKVGEFFPGPSKTTRAYQHREATLVSQLTEWGWKVQQRQTIRSRFYFAWLLDLVR
Sequences:
>Translated_221_residues MQEKTIVRDYFNSVGFERWRRIYGEEEVNFVQKDIRLGHARTVETVLQWLGDPSGLRICDAGCGVGSLSLPLATRGAQVF ASDISEQMVNEARRRQQMELGSTDNPHFWVSDLEELTGEYDVVICLDVMIHYPEAEALRMLKHLTCLAQSRLIFSFAPKT PWLTLLKKVGEFFPGPSKTTRAYQHREATLVSQLTEWGWKVQQRQTIRSRFYFAWLLDLVR >Mature_221_residues MQEKTIVRDYFNSVGFERWRRIYGEEEVNFVQKDIRLGHARTVETVLQWLGDPSGLRICDAGCGVGSLSLPLATRGAQVF ASDISEQMVNEARRRQQMELGSTDNPHFWVSDLEELTGEYDVVICLDVMIHYPEAEALRMLKHLTCLAQSRLIFSFAPKT PWLTLLKKVGEFFPGPSKTTRAYQHREATLVSQLTEWGWKVQQRQTIRSRFYFAWLLDLVR
Specific function: Converts Mg-protoporphyrin IX to Mg-protoporphyrin IX methylester using S-adenosyl-L-methionine as a cofactor [H]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010251 - InterPro: IPR010940 [H]
Pfam domain/function: PF07109 Mg-por_mtran_C [H]
EC number: =2.1.1.11 [H]
Molecular weight: Translated: 25602; Mature: 25602
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEKTIVRDYFNSVGFERWRRIYGEEEVNFVQKDIRLGHARTVETVLQWLGDPSGLRICD CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEE AGCGVGSLSLPLATRGAQVFASDISEQMVNEARRRQQMELGSTDNPHFWVSDLEELTGEY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC DVVICLDVMIHYPEAEALRMLKHLTCLAQSRLIFSFAPKTPWLTLLKKVGEFFPGPSKTT CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCHHH RAYQHREATLVSQLTEWGWKVQQRQTIRSRFYFAWLLDLVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MQEKTIVRDYFNSVGFERWRRIYGEEEVNFVQKDIRLGHARTVETVLQWLGDPSGLRICD CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEE AGCGVGSLSLPLATRGAQVFASDISEQMVNEARRRQQMELGSTDNPHFWVSDLEELTGEY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC DVVICLDVMIHYPEAEALRMLKHLTCLAQSRLIFSFAPKTPWLTLLKKVGEFFPGPSKTT CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCHHH RAYQHREATLVSQLTEWGWKVQQRQTIRSRFYFAWLLDLVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8704138; 8590279; 8905231 [H]