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The map label for this gene is yidA [H]

Identifier: 86609548

GI number: 86609548

Start: 2196513

End: 2197373

Strand: Reverse

Name: yidA [H]

Synonym: CYB_2101

Alternate gene names: 86609548

Gene position: 2197373-2196513 (Counterclockwise)

Preceding gene: 86609554

Following gene: 86609547

Centisome position: 72.12

GC content: 59.12

Gene sequence:

>861_bases
ATGCAAACTCAGGCTAACGTCCAAGCCGAGGAAAGAGAGCGGGCATCTTCTCCACCCCGTGCCCAGATTCGGCTGTTGGT
GGTGGATATCGATGGCACGATTGCCGGGCCTTCCAACCAGGTTTCAGAGCCGGTTCGGGAGGCCATTCAGAAGGCCAAAG
CAGCAGGGGTGCGAGTAGCCATCGCTACGGGTCGCATGCATCGTTCTGCCGAGCGGTTCCACTACGCGATTGGGGCCGAT
ATGCCCCTATGCAGCTACCAGGGGGCTTTAATTCGGGATCCCGATAGCCAAAAGACCCTAAAGCACTGGAGCCTGGACTG
GCCGCTGGCCGAGGAGTTGTTGCAAGCGTTGCAGGATCAGCCGGTGGGGGTTCACCTCTACATCGATGACCAGCTCTACT
TACGGGAGCTGAGCCCTCTCAGTCAGGCCTATGCTGAGCGCTCTCAGGTGCCGTTCCAGATGTTCTCTTCCGCCCAATAC
GGACGAAGCCCCACCAAGATCCTGGCTGTTTCTGAGGATACCGAGTTCCTGCAGGAATTGCAGGGATCCCTGCGGCGGCG
GTATTCCCCTGAGCAGCTCTATCTCACCCGTTCGGAGCCGATTTTTCTCGAGGCTACCCATCCGGCGGTGAACAAGGGCA
ATGCCGTTCGTTTTTTGGCGGAGGAAATGCTGGGGTTGTCGGCGGAGCAGGTGATGGCCATTGGCGATGGCGACAACGAC
ATTGAGATGATTCAATACGCCGGGATCGGGGTGGCGATGGGAAATGCCTCGCCAGCTCTCTTGCCCCATGCCGATTGGAT
TGCCCCTCCTGTGGCAGAAGACGGGGTGGCGGCAGCCATCGAGACCTTCATCCTCAGCTAG

Upstream 100 bases:

>100_bases
TTGATTCTTTGTGTACTGAGCCGGCCAATGACCGTCAACCAATCGAGGCAGAGCCATGCTACGGTCTGGAAGGTTGCCAG
GAGGAGGGCAAACAACAGCA

Downstream 100 bases:

>100_bases
GCAGGGATCCCATGCTGGGTCTGGCTTCTTCTCCCTTTCCTGAGGTCACCCTGCGTCCGGCGCAGCAACAGGCGTTGGCC
TACCAATCGGGGCCGCTGGG

Product: HAD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MQTQANVQAEERERASSPPRAQIRLLVVDIDGTIAGPSNQVSEPVREAIQKAKAAGVRVAIATGRMHRSAERFHYAIGAD
MPLCSYQGALIRDPDSQKTLKHWSLDWPLAEELLQALQDQPVGVHLYIDDQLYLRELSPLSQAYAERSQVPFQMFSSAQY
GRSPTKILAVSEDTEFLQELQGSLRRRYSPEQLYLTRSEPIFLEATHPAVNKGNAVRFLAEEMLGLSAEQVMAIGDGDND
IEMIQYAGIGVAMGNASPALLPHADWIAPPVAEDGVAAAIETFILS

Sequences:

>Translated_286_residues
MQTQANVQAEERERASSPPRAQIRLLVVDIDGTIAGPSNQVSEPVREAIQKAKAAGVRVAIATGRMHRSAERFHYAIGAD
MPLCSYQGALIRDPDSQKTLKHWSLDWPLAEELLQALQDQPVGVHLYIDDQLYLRELSPLSQAYAERSQVPFQMFSSAQY
GRSPTKILAVSEDTEFLQELQGSLRRRYSPEQLYLTRSEPIFLEATHPAVNKGNAVRFLAEEMLGLSAEQVMAIGDGDND
IEMIQYAGIGVAMGNASPALLPHADWIAPPVAEDGVAAAIETFILS
>Mature_286_residues
MQTQANVQAEERERASSPPRAQIRLLVVDIDGTIAGPSNQVSEPVREAIQKAKAAGVRVAIATGRMHRSAERFHYAIGAD
MPLCSYQGALIRDPDSQKTLKHWSLDWPLAEELLQALQDQPVGVHLYIDDQLYLRELSPLSQAYAERSQVPFQMFSSAQY
GRSPTKILAVSEDTEFLQELQGSLRRRYSPEQLYLTRSEPIFLEATHPAVNKGNAVRFLAEEMLGLSAEQVMAIGDGDND
IEMIQYAGIGVAMGNASPALLPHADWIAPPVAEDGVAAAIETFILS

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=277, Percent_Identity=32.8519855595668, Blast_Score=127, Evalue=6e-31,
Organism=Escherichia coli, GI48994981, Length=234, Percent_Identity=25.6410256410256, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1786982, Length=273, Percent_Identity=24.9084249084249, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI87081741, Length=244, Percent_Identity=28.2786885245902, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 31438; Mature: 31438

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTQANVQAEERERASSPPRAQIRLLVVDIDGTIAGPSNQVSEPVREAIQKAKAAGVRVA
CCCCCCCCHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEE
IATGRMHRSAERFHYAIGADMPLCSYQGALIRDPDSQKTLKHWSLDWPLAEELLQALQDQ
EECCHHHHHHHHHEEECCCCCCCCCCCCCEEECCCCHHHHHHCCCCCHHHHHHHHHHHCC
PVGVHLYIDDQLYLRELSPLSQAYAERSQVPFQMFSSAQYGRSPTKILAVSEDTEFLQEL
CCEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHCHHCCCCCCEEEEECCCHHHHHHH
QGSLRRRYSPEQLYLTRSEPIFLEATHPAVNKGNAVRFLAEEMLGLSAEQVMAIGDGDND
HHHHHHCCCCCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHEEEECCCCCC
IEMIQYAGIGVAMGNASPALLPHADWIAPPVAEDGVAAAIETFILS
EEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MQTQANVQAEERERASSPPRAQIRLLVVDIDGTIAGPSNQVSEPVREAIQKAKAAGVRVA
CCCCCCCCHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEE
IATGRMHRSAERFHYAIGADMPLCSYQGALIRDPDSQKTLKHWSLDWPLAEELLQALQDQ
EECCHHHHHHHHHEEECCCCCCCCCCCCCEEECCCCHHHHHHCCCCCHHHHHHHHHHHCC
PVGVHLYIDDQLYLRELSPLSQAYAERSQVPFQMFSSAQYGRSPTKILAVSEDTEFLQEL
CCEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHCHHCCCCCCEEEEECCCHHHHHHH
QGSLRRRYSPEQLYLTRSEPIFLEATHPAVNKGNAVRFLAEEMLGLSAEQVMAIGDGDND
HHHHHHCCCCCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHEEEECCCCCC
IEMIQYAGIGVAMGNASPALLPHADWIAPPVAEDGVAAAIETFILS
EEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]