| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is ppk [H]
Identifier: 86609530
GI number: 86609530
Start: 2177548
End: 2179722
Strand: Reverse
Name: ppk [H]
Synonym: CYB_2082
Alternate gene names: 86609530
Gene position: 2179722-2177548 (Counterclockwise)
Preceding gene: 86609531
Following gene: 86609527
Centisome position: 71.54
GC content: 60.87
Gene sequence:
>2175_bases ATGACTCCGCGCCCCAAGGAAACCGACCCTTCCTGGCCACCTTGCAACCCCGACACGACGGGCTGCCCCCCTGATGCCGG ACAACCAGGGATCCGGACTACACCCATCCAAGAGGGCTATGCTCTGCCGGAGCAGTATTTCAACCGGGAGCTGAGCTGGA TTGAATTCAATGCCCGGGTTTTGCACGAGGCCCTGGATGAGCGCACACCTCTGCTGGAGCGGCTGAAGTTTCTGGCCATC TTTGAGAGCAACCTGGACGAATTTTTCATGGTGCGGGTGGCGGTGATCCGTCGTCAGTTGGAAACGGGCGTGTTGGTGCT AACCCCGGATGGCCTTACACCGCAGCAGCAGTTGCAGCAGATCTCGAGCCACCTGCGCCCCCTGATTCGAAAATTGCACA CTTGCTTCCGGCAGGAACTGGTGCCCAAGCTGGCGGAACAGGGCATTCACATCCGCGATTTTTCCGAGCTGGCCGAGTCG GAACGGCAGGAGCTGCGGGACTACTTTGAGAGGCGTTTGTTTCCAGTGCTCACCCCCTTGGCGGTGGATCCAGGCCATCC CTTTCCCTACATCTCCAACCTCAGCCTCAGCTTGGCGGTGGTGGTGCGGGATCCAGAGACTGGCAAGGAGCATTTTGCTC GCGTGAAGGTGCCCAACACCTTGCCCCGCTTTGTGCCGCTGCGGGATGGGGTAAGCTTTGTGCCGCTGGATCAGGTGATT GCCCACCATCTGGAAGCGCTGTTTGTCGGCATGCAGGTGCTGGAGTACTACCCCTTCCGCATCACCCGGGATGCCGATCT GGAAATCCAAGAGGACGAGGCCGACGATCTGCTGGCTGCCATTCAAGAAGAGCTGCGCAAGCGCCGCTTCGGCTCAGTGG TGCGCATGGAGATTGCCAGCCAAACTCCGGCAGCCATCCGACAACGGCTCAGCGAAGAGATGCGCCTCAACAGTGACTCG GTGTACGAAGTGGATGGCCTCTTGAGTATGGGGGGGGTGATGGCGTTTCTCAGCCTGGATCGGCCCGATTTGAAGGATCC CCCTTGGGGGCCGGTCACCCCGCCCCGCCTGCGCACTGCCTCGGTCAGCGATGAGCCGGTGGATATCTTTGCCGTCATCC GGGAAGGGGATCTGTTGGTGCATCACCCCTACGATTCTTTTGCCGCCAGCGTGGAACGGTTTTTGGAGGAGGCCGCCAAC GATCCGCAGGTGCTCACCATTAAGCAAACCCTCTACCGCACCTCCGGCGACTCGACGGTGGTGAAATCCCTCATTCAGGC CGCCGAAAACGGCAAGCAGGTGGCCGCTCTGGTGGAGCTCAAAGCCCGTTTCGACGAAGAAAACAACATCCTCTGGGCCA AAAAGCTGGAGAAAGCCGGGGTCCACGTGGCCTACGGCCTGCCGGGGCTGAAAATCCACTGCAAACTGGCTTTGGTGGTG CGGGAAGAGGAGGGATCCCTGCGCCGCTACGTCCACATCGGTACCGGCAACTACAACCCCAAAACCGCCCGTATCTATAC CGACCTAGGGCTGTTCACTTGCGATGAGACCCTCTGCAACGACGTTACGGAGTTGTTTAACCTGCTGACGGGCTACTCGC GGCAACGGCAATTCCGCAAGCTCTTGGTGGCCCCCAGAACCCTGCGCCAGGGCATGGAAGCCCTGATCCGCAGAGAGATC CGCCATGCCCAAGCGGGGGGCCAGGGGCGTATCATCGTCAAGATCAACTCTCTCACCGACCCGGAAATGATCCGGCTGCT CTACGAGGCCAGCCAAGCCGGGGTGGAGATCGATCTCATCGTGCGGGGCATGTGCTGCCTCAAGCCCGGGATCCCAGGCC TAAGCGAACGCATCCGCGTGATCAGCATCATCGGGCGCTTCCTGGAGCACTCCCGCATCTTCTACTTCTACAATGGCGGC CAGGAAGAGTACTTCATCGGCAGTGCCGACTACATGACCCGCAACCTGGATCGGCGCGTTGAGGTGGTTACCCCTGTGGA GGATCCCGCGTTGCAGCGGGAGCTCAAGGCGATCTTGGACATCTGCCTGACGGACAACCGGCAAGCCTGGGAGTTGCGCC CTGATGGCACCTACGTGCAGCGGCAACCCAAGCCAGGAGAGCCTGTGCGCTCCACCCACCAACGCCTGATGGAGCGGGCC GCCAGCCGCATTTAG
Upstream 100 bases:
>100_bases TTGGGCACTTCTCCTTCGCCTAAGCAGAACCCCGCAGGATAGGATTGGGTCGGCTCCAGCCGTTGTTGACGTGTTTGAGA TAACCCAGCCCTCTGCCGCC
Downstream 100 bases:
>100_bases CAGGATGACTCTCACTGCTAACCTCTCTCTCAGAGGGAGAGAGGAGCAGCCTCGCCGCTATCGGGAATGGCCACCAAAGC TCAGGATCCGGTGGTCTTGG
Product: polyphosphate kinase
Products: NA
Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]
Number of amino acids: Translated: 724; Mature: 723
Protein sequence:
>724_residues MTPRPKETDPSWPPCNPDTTGCPPDAGQPGIRTTPIQEGYALPEQYFNRELSWIEFNARVLHEALDERTPLLERLKFLAI FESNLDEFFMVRVAVIRRQLETGVLVLTPDGLTPQQQLQQISSHLRPLIRKLHTCFRQELVPKLAEQGIHIRDFSELAES ERQELRDYFERRLFPVLTPLAVDPGHPFPYISNLSLSLAVVVRDPETGKEHFARVKVPNTLPRFVPLRDGVSFVPLDQVI AHHLEALFVGMQVLEYYPFRITRDADLEIQEDEADDLLAAIQEELRKRRFGSVVRMEIASQTPAAIRQRLSEEMRLNSDS VYEVDGLLSMGGVMAFLSLDRPDLKDPPWGPVTPPRLRTASVSDEPVDIFAVIREGDLLVHHPYDSFAASVERFLEEAAN DPQVLTIKQTLYRTSGDSTVVKSLIQAAENGKQVAALVELKARFDEENNILWAKKLEKAGVHVAYGLPGLKIHCKLALVV REEEGSLRRYVHIGTGNYNPKTARIYTDLGLFTCDETLCNDVTELFNLLTGYSRQRQFRKLLVAPRTLRQGMEALIRREI RHAQAGGQGRIIVKINSLTDPEMIRLLYEASQAGVEIDLIVRGMCCLKPGIPGLSERIRVISIIGRFLEHSRIFYFYNGG QEEYFIGSADYMTRNLDRRVEVVTPVEDPALQRELKAILDICLTDNRQAWELRPDGTYVQRQPKPGEPVRSTHQRLMERA ASRI
Sequences:
>Translated_724_residues MTPRPKETDPSWPPCNPDTTGCPPDAGQPGIRTTPIQEGYALPEQYFNRELSWIEFNARVLHEALDERTPLLERLKFLAI FESNLDEFFMVRVAVIRRQLETGVLVLTPDGLTPQQQLQQISSHLRPLIRKLHTCFRQELVPKLAEQGIHIRDFSELAES ERQELRDYFERRLFPVLTPLAVDPGHPFPYISNLSLSLAVVVRDPETGKEHFARVKVPNTLPRFVPLRDGVSFVPLDQVI AHHLEALFVGMQVLEYYPFRITRDADLEIQEDEADDLLAAIQEELRKRRFGSVVRMEIASQTPAAIRQRLSEEMRLNSDS VYEVDGLLSMGGVMAFLSLDRPDLKDPPWGPVTPPRLRTASVSDEPVDIFAVIREGDLLVHHPYDSFAASVERFLEEAAN DPQVLTIKQTLYRTSGDSTVVKSLIQAAENGKQVAALVELKARFDEENNILWAKKLEKAGVHVAYGLPGLKIHCKLALVV REEEGSLRRYVHIGTGNYNPKTARIYTDLGLFTCDETLCNDVTELFNLLTGYSRQRQFRKLLVAPRTLRQGMEALIRREI RHAQAGGQGRIIVKINSLTDPEMIRLLYEASQAGVEIDLIVRGMCCLKPGIPGLSERIRVISIIGRFLEHSRIFYFYNGG QEEYFIGSADYMTRNLDRRVEVVTPVEDPALQRELKAILDICLTDNRQAWELRPDGTYVQRQPKPGEPVRSTHQRLMERA ASRI >Mature_723_residues TPRPKETDPSWPPCNPDTTGCPPDAGQPGIRTTPIQEGYALPEQYFNRELSWIEFNARVLHEALDERTPLLERLKFLAIF ESNLDEFFMVRVAVIRRQLETGVLVLTPDGLTPQQQLQQISSHLRPLIRKLHTCFRQELVPKLAEQGIHIRDFSELAESE RQELRDYFERRLFPVLTPLAVDPGHPFPYISNLSLSLAVVVRDPETGKEHFARVKVPNTLPRFVPLRDGVSFVPLDQVIA HHLEALFVGMQVLEYYPFRITRDADLEIQEDEADDLLAAIQEELRKRRFGSVVRMEIASQTPAAIRQRLSEEMRLNSDSV YEVDGLLSMGGVMAFLSLDRPDLKDPPWGPVTPPRLRTASVSDEPVDIFAVIREGDLLVHHPYDSFAASVERFLEEAAND PQVLTIKQTLYRTSGDSTVVKSLIQAAENGKQVAALVELKARFDEENNILWAKKLEKAGVHVAYGLPGLKIHCKLALVVR EEEGSLRRYVHIGTGNYNPKTARIYTDLGLFTCDETLCNDVTELFNLLTGYSRQRQFRKLLVAPRTLRQGMEALIRREIR HAQAGGQGRIIVKINSLTDPEMIRLLYEASQAGVEIDLIVRGMCCLKPGIPGLSERIRVISIIGRFLEHSRIFYFYNGGQ EEYFIGSADYMTRNLDRRVEVVTPVEDPALQRELKAILDICLTDNRQAWELRPDGTYVQRQPKPGEPVRSTHQRLMERAA SRI
Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]
COG id: COG0855
COG function: function code P; Polyphosphate kinase
Gene ontology:
Cell location: Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polyphosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788847, Length=666, Percent_Identity=36.3363363363363, Blast_Score=414, Evalue=1e-116,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003414 [H]
Pfam domain/function: PF02503 PP_kinase [H]
EC number: =2.7.4.1 [H]
Molecular weight: Translated: 82376; Mature: 82244
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPRPKETDPSWPPCNPDTTGCPPDAGQPGIRTTPIQEGYALPEQYFNRELSWIEFNARV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEHHHHH LHEALDERTPLLERLKFLAIFESNLDEFFMVRVAVIRRQLETGVLVLTPDGLTPQQQLQQ HHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHH ISSHLRPLIRKLHTCFRQELVPKLAEQGIHIRDFSELAESERQELRDYFERRLFPVLTPL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AVDPGHPFPYISNLSLSLAVVVRDPETGKEHFARVKVPNTLPRFVPLRDGVSFVPLDQVI CCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHEEECCCCCCCCCEECCCCCCCCCHHHHH AHHLEALFVGMQVLEYYPFRITRDADLEIQEDEADDLLAAIQEELRKRRFGSVVRMEIAS HHHHHHHHHHHHHHHHCCCEEECCCCCEECCCCHHHHHHHHHHHHHHHHHCCCEEEHHHC QTPAAIRQRLSEEMRLNSDSVYEVDGLLSMGGVMAFLSLDRPDLKDPPWGPVTPPRLRTA CCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEC SVSDEPVDIFAVIREGDLLVHHPYDSFAASVERFLEEAANDPQVLTIKQTLYRTSGDSTV CCCCCCEEEEEEEECCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCHHH VKSLIQAAENGKQVAALVELKARFDEENNILWAKKLEKAGVHVAYGLPGLKIHCKLALVV HHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCEEEECCCCCEEEEEEEEEE REEEGSLRRYVHIGTGNYNPKTARIYTDLGLFTCDETLCNDVTELFNLLTGYSRQRQFRK ECCCCCEEEEEEEECCCCCCCEEEEEEECCCEECCHHHHHHHHHHHHHHHCHHHHHHHHH LLVAPRTLRQGMEALIRREIRHAQAGGQGRIIVKINSLTDPEMIRLLYEASQAGVEIDLI HHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEHH VRGMCCLKPGIPGLSERIRVISIIGRFLEHSRIFYFYNGGQEEYFIGSADYMTRNLDRRV HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEECCHHHHHHCCCCCE EVVTPVEDPALQRELKAILDICLTDNRQAWELRPDGTYVQRQPKPGEPVRSTHQRLMERA EEECCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHHHH ASRI HHCC >Mature Secondary Structure TPRPKETDPSWPPCNPDTTGCPPDAGQPGIRTTPIQEGYALPEQYFNRELSWIEFNARV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEHHHHH LHEALDERTPLLERLKFLAIFESNLDEFFMVRVAVIRRQLETGVLVLTPDGLTPQQQLQQ HHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHH ISSHLRPLIRKLHTCFRQELVPKLAEQGIHIRDFSELAESERQELRDYFERRLFPVLTPL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AVDPGHPFPYISNLSLSLAVVVRDPETGKEHFARVKVPNTLPRFVPLRDGVSFVPLDQVI CCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHEEECCCCCCCCCEECCCCCCCCCHHHHH AHHLEALFVGMQVLEYYPFRITRDADLEIQEDEADDLLAAIQEELRKRRFGSVVRMEIAS HHHHHHHHHHHHHHHHCCCEEECCCCCEECCCCHHHHHHHHHHHHHHHHHCCCEEEHHHC QTPAAIRQRLSEEMRLNSDSVYEVDGLLSMGGVMAFLSLDRPDLKDPPWGPVTPPRLRTA CCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEC SVSDEPVDIFAVIREGDLLVHHPYDSFAASVERFLEEAANDPQVLTIKQTLYRTSGDSTV CCCCCCEEEEEEEECCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCHHH VKSLIQAAENGKQVAALVELKARFDEENNILWAKKLEKAGVHVAYGLPGLKIHCKLALVV HHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCEEEECCCCCEEEEEEEEEE REEEGSLRRYVHIGTGNYNPKTARIYTDLGLFTCDETLCNDVTELFNLLTGYSRQRQFRK ECCCCCEEEEEEEECCCCCCCEEEEEEECCCEECCHHHHHHHHHHHHHHHCHHHHHHHHH LLVAPRTLRQGMEALIRREIRHAQAGGQGRIIVKINSLTDPEMIRLLYEASQAGVEIDLI HHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEHH VRGMCCLKPGIPGLSERIRVISIIGRFLEHSRIFYFYNGGQEEYFIGSADYMTRNLDRRV HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEECCHHHHHHCCCCCE EVVTPVEDPALQRELKAILDICLTDNRQAWELRPDGTYVQRQPKPGEPVRSTHQRLMERA EEECCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHHHH ASRI HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12240834 [H]