| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609511
Identifier: 86609511
GI number: 86609511
Start: 2160122
End: 2160466
Strand: Direct
Name: 86609511
Synonym: CYB_2063
Alternate gene names: NA
Gene position: 2160122-2160466 (Clockwise)
Preceding gene: 86609510
Following gene: 86609512
Centisome position: 70.9
GC content: 57.68
Gene sequence:
>345_bases ATGTCTGCTGCCGAACCGACTACCTATCATTTTGTCGTTGCCAGCCTGTCTTTCTTACGTTCTGAGCCTCTGGAAGAGGT GCTGGAGGAGCGTCGTCGATACTGCGAGGAGCACCATCACCCTGTCGATTTCTTCTGGGTGCCGCAGCCGGCCTTCATGG AGGCTCCAGAGTTAAAGCCCCTGCGGGACAAGTTGAAGGAGCCCCTGGGGGCAGTGGTATCCACCAACGCGGATTTTATT CGTTGGCTGAGCCTGCGCCTGACTTTTGTGGAAAAGGGCAGCTTTGTGGCTCCCAGCGAGTCGATCCCGGATCCCTTGCG CTCCTTGTCTGCCGCAGGAAGCTAG
Upstream 100 bases:
>100_bases CATCTGCTCAAATCTGCCTCTCTCTGAGGGAGAGGATCTGCAAGGAGCGGTGGACGCCCGGCTCTAGCCTTTATTCTCAA CACAGTTCCACAGCAATCTT
Downstream 100 bases:
>100_bases GCCTGCCGATTCCCAAGATTTGGGTTGGTGGATTGGAAGGCGGGCCAAGATAAGATCGGGGCACCCCATTTCCACTTTTG TTTGCTGACGGGATCCCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MSAAEPTTYHFVVASLSFLRSEPLEEVLEERRRYCEEHHHPVDFFWVPQPAFMEAPELKPLRDKLKEPLGAVVSTNADFI RWLSLRLTFVEKGSFVAPSESIPDPLRSLSAAGS
Sequences:
>Translated_114_residues MSAAEPTTYHFVVASLSFLRSEPLEEVLEERRRYCEEHHHPVDFFWVPQPAFMEAPELKPLRDKLKEPLGAVVSTNADFI RWLSLRLTFVEKGSFVAPSESIPDPLRSLSAAGS >Mature_113_residues SAAEPTTYHFVVASLSFLRSEPLEEVLEERRRYCEEHHHPVDFFWVPQPAFMEAPELKPLRDKLKEPLGAVVSTNADFIR WLSLRLTFVEKGSFVAPSESIPDPLRSLSAAGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ycf54 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019616 [H]
Pfam domain/function: PF10674 DUF2488 [H]
EC number: NA
Molecular weight: Translated: 12941; Mature: 12810
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAEPTTYHFVVASLSFLRSEPLEEVLEERRRYCEEHHHPVDFFWVPQPAFMEAPELKP CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHCCCCCCH LRDKLKEPLGAVVSTNADFIRWLSLRLTFVEKGSFVAPSESIPDPLRSLSAAGS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHCCCC >Mature Secondary Structure SAAEPTTYHFVVASLSFLRSEPLEEVLEERRRYCEEHHHPVDFFWVPQPAFMEAPELKP CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHCCCCCCH LRDKLKEPLGAVVSTNADFIRWLSLRLTFVEKGSFVAPSESIPDPLRSLSAAGS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]