Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609510

Identifier: 86609510

GI number: 86609510

Start: 2159578

End: 2160048

Strand: Direct

Name: 86609510

Synonym: CYB_2062

Alternate gene names: NA

Gene position: 2159578-2160048 (Clockwise)

Preceding gene: 86609509

Following gene: 86609511

Centisome position: 70.88

GC content: 58.81

Gene sequence:

>471_bases
ATGTCCCACCCCCATGGATCCCTCCGCGCCGGTATCACTGCTCTCAAGCAGGAGCGCTACCTGGAGGCGATCAACCTTCT
CGAGTCCTTCTGCTACTGCTGTTCCATCCAAGAAAGACAAGAGAGTTTGTCCCGCCGCCTGAGCGAGCGCAATGGCTCGA
GGGCAGATCCGGAAGAATGCGTTTTGGCTCGTGTAGCTCTGATCATGGCATATCAGGGCAGTGGTGACTTGGAGCGCTCA
ACTGCCCTTTGCCAAGAGCTGTTGGAGGAGAAGGAAACTCCTGAGTCCGCTCCCTGGGCTCGGGAATGGGCAGCTCAGGC
TCTACCTACCCTCAAGCAGGCTTCAGAACACTCCATGCCCCCTGAGGAAGTCATGGCGCGGCTACCCGTTCTCCGGCAGT
TGGAAGACTGTCAGCCGCTGTGTAGCTCCCGCGATCCGGCTCCGCATCTGCTCAAATCTGCCTCTCTCTGA

Upstream 100 bases:

>100_bases
TAGTAGTTTTAGACACGAAACCTTGGATGAGAAGACGGGCCACTGACTGGATAACCTTCAGGTGCAAGTCCGTCCGAACT
CTTTTCTTGTACTTAGGCTC

Downstream 100 bases:

>100_bases
GGGAGAGGATCTGCAAGGAGCGGTGGACGCCCGGCTCTAGCCTTTATTCTCAACACAGTTCCACAGCAATCTTATGTCTG
CTGCCGAACCGACTACCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MSHPHGSLRAGITALKQERYLEAINLLESFCYCCSIQERQESLSRRLSERNGSRADPEECVLARVALIMAYQGSGDLERS
TALCQELLEEKETPESAPWAREWAAQALPTLKQASEHSMPPEEVMARLPVLRQLEDCQPLCSSRDPAPHLLKSASL

Sequences:

>Translated_156_residues
MSHPHGSLRAGITALKQERYLEAINLLESFCYCCSIQERQESLSRRLSERNGSRADPEECVLARVALIMAYQGSGDLERS
TALCQELLEEKETPESAPWAREWAAQALPTLKQASEHSMPPEEVMARLPVLRQLEDCQPLCSSRDPAPHLLKSASL
>Mature_155_residues
SHPHGSLRAGITALKQERYLEAINLLESFCYCCSIQERQESLSRRLSERNGSRADPEECVLARVALIMAYQGSGDLERST
ALCQELLEEKETPESAPWAREWAAQALPTLKQASEHSMPPEEVMARLPVLRQLEDCQPLCSSRDPAPHLLKSASL

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17446; Mature: 17315

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHPHGSLRAGITALKQERYLEAINLLESFCYCCSIQERQESLSRRLSERNGSRADPEEC
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHH
VLARVALIMAYQGSGDLERSTALCQELLEEKETPESAPWAREWAAQALPTLKQASEHSMP
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PEEVMARLPVLRQLEDCQPLCSSRDPAPHLLKSASL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC
>Mature Secondary Structure 
SHPHGSLRAGITALKQERYLEAINLLESFCYCCSIQERQESLSRRLSERNGSRADPEEC
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHH
VLARVALIMAYQGSGDLERSTALCQELLEEKETPESAPWAREWAAQALPTLKQASEHSMP
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PEEVMARLPVLRQLEDCQPLCSSRDPAPHLLKSASL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA