| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609510
Identifier: 86609510
GI number: 86609510
Start: 2159578
End: 2160048
Strand: Direct
Name: 86609510
Synonym: CYB_2062
Alternate gene names: NA
Gene position: 2159578-2160048 (Clockwise)
Preceding gene: 86609509
Following gene: 86609511
Centisome position: 70.88
GC content: 58.81
Gene sequence:
>471_bases ATGTCCCACCCCCATGGATCCCTCCGCGCCGGTATCACTGCTCTCAAGCAGGAGCGCTACCTGGAGGCGATCAACCTTCT CGAGTCCTTCTGCTACTGCTGTTCCATCCAAGAAAGACAAGAGAGTTTGTCCCGCCGCCTGAGCGAGCGCAATGGCTCGA GGGCAGATCCGGAAGAATGCGTTTTGGCTCGTGTAGCTCTGATCATGGCATATCAGGGCAGTGGTGACTTGGAGCGCTCA ACTGCCCTTTGCCAAGAGCTGTTGGAGGAGAAGGAAACTCCTGAGTCCGCTCCCTGGGCTCGGGAATGGGCAGCTCAGGC TCTACCTACCCTCAAGCAGGCTTCAGAACACTCCATGCCCCCTGAGGAAGTCATGGCGCGGCTACCCGTTCTCCGGCAGT TGGAAGACTGTCAGCCGCTGTGTAGCTCCCGCGATCCGGCTCCGCATCTGCTCAAATCTGCCTCTCTCTGA
Upstream 100 bases:
>100_bases TAGTAGTTTTAGACACGAAACCTTGGATGAGAAGACGGGCCACTGACTGGATAACCTTCAGGTGCAAGTCCGTCCGAACT CTTTTCTTGTACTTAGGCTC
Downstream 100 bases:
>100_bases GGGAGAGGATCTGCAAGGAGCGGTGGACGCCCGGCTCTAGCCTTTATTCTCAACACAGTTCCACAGCAATCTTATGTCTG CTGCCGAACCGACTACCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MSHPHGSLRAGITALKQERYLEAINLLESFCYCCSIQERQESLSRRLSERNGSRADPEECVLARVALIMAYQGSGDLERS TALCQELLEEKETPESAPWAREWAAQALPTLKQASEHSMPPEEVMARLPVLRQLEDCQPLCSSRDPAPHLLKSASL
Sequences:
>Translated_156_residues MSHPHGSLRAGITALKQERYLEAINLLESFCYCCSIQERQESLSRRLSERNGSRADPEECVLARVALIMAYQGSGDLERS TALCQELLEEKETPESAPWAREWAAQALPTLKQASEHSMPPEEVMARLPVLRQLEDCQPLCSSRDPAPHLLKSASL >Mature_155_residues SHPHGSLRAGITALKQERYLEAINLLESFCYCCSIQERQESLSRRLSERNGSRADPEECVLARVALIMAYQGSGDLERST ALCQELLEEKETPESAPWAREWAAQALPTLKQASEHSMPPEEVMARLPVLRQLEDCQPLCSSRDPAPHLLKSASL
Specific function: Unknown
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17446; Mature: 17315
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHPHGSLRAGITALKQERYLEAINLLESFCYCCSIQERQESLSRRLSERNGSRADPEEC CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHH VLARVALIMAYQGSGDLERSTALCQELLEEKETPESAPWAREWAAQALPTLKQASEHSMP HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC PEEVMARLPVLRQLEDCQPLCSSRDPAPHLLKSASL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC >Mature Secondary Structure SHPHGSLRAGITALKQERYLEAINLLESFCYCCSIQERQESLSRRLSERNGSRADPEEC CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHH VLARVALIMAYQGSGDLERSTALCQELLEEKETPESAPWAREWAAQALPTLKQASEHSMP HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC PEEVMARLPVLRQLEDCQPLCSSRDPAPHLLKSASL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA