| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609496
Identifier: 86609496
GI number: 86609496
Start: 2149242
End: 2149673
Strand: Direct
Name: 86609496
Synonym: CYB_2049
Alternate gene names: NA
Gene position: 2149242-2149673 (Clockwise)
Preceding gene: 86609494
Following gene: 86609498
Centisome position: 70.54
GC content: 57.87
Gene sequence:
>432_bases TTGAAAACAGAGAAACGGAGAAACCTGCTCCTCTATGGTACGGGGTTTGATCCCCTTTGCAAAGCGTCATATCCCCTCTC AGCTTGGCACTCAAGGCTCCAGGGGGGACGTGGACTCTCGCGACAGGATCCCGTTCGCGTTGGCGGAACGGAGTCCTTTC AAGCTCGCATCGCCGGGCCACAGACCCTGCAAGACTTGGGCAACACGGTGCCAGGGATCCAGCCGTTCCGTTCGCGTTGG CGGGACGGAGCCCTTGCTGCTTTGAGGCTCTGGAGAAGACTGCTCAGAGGGAGCGGGATCCCTTTCTTCCAACTGCAGAG AAAGCTGCTGCAACTGCATGTAGATGCTGTTCACGGCCAGCATGGCCAAGACCGTGCCAAAAAACTTGGTGCGGGATCCC ATAGGTCAACCCCTGTGCGAGAACAAGAGTAG
Upstream 100 bases:
>100_bases CCCCCAACCGGCTGAAATCGGCTGAAAGGATGGAAGGGGCGATCACAATCGGCTTTTGCCCAGAGGTCGCTGACGGCTGC ACCATGGTGAGTCCTGGGGA
Downstream 100 bases:
>100_bases GGTCGTCGCCGGTGCGTTAGCTCCACCTTAGCTCACAGGTTTGGCTGGCTGTTGCGAGAAAATAAACCTGTTTGCACCAG ATCCTGCAAAGCCCTCGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKTEKRRNLLLYGTGFDPLCKASYPLSAWHSRLQGGRGLSRQDPVRVGGTESFQARIAGPQTLQDLGNTVPGIQPFRSRW RDGALAALRLWRRLLRGSGIPFFQLQRKLLQLHVDAVHGQHGQDRAKKLGAGSHRSTPVREQE
Sequences:
>Translated_143_residues MKTEKRRNLLLYGTGFDPLCKASYPLSAWHSRLQGGRGLSRQDPVRVGGTESFQARIAGPQTLQDLGNTVPGIQPFRSRW RDGALAALRLWRRLLRGSGIPFFQLQRKLLQLHVDAVHGQHGQDRAKKLGAGSHRSTPVREQE >Mature_143_residues MKTEKRRNLLLYGTGFDPLCKASYPLSAWHSRLQGGRGLSRQDPVRVGGTESFQARIAGPQTLQDLGNTVPGIQPFRSRW RDGALAALRLWRRLLRGSGIPFFQLQRKLLQLHVDAVHGQHGQDRAKKLGAGSHRSTPVREQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16045; Mature: 16045
Theoretical pI: Translated: 12.01; Mature: 12.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTEKRRNLLLYGTGFDPLCKASYPLSAWHSRLQGGRGLSRQDPVRVGGTESFQARIAGP CCCCCCCCEEEEECCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHCCCH QTLQDLGNTVPGIQPFRSRWRDGALAALRLWRRLLRGSGIPFFQLQRKLLQLHVDAVHGQ HHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC HGQDRAKKLGAGSHRSTPVREQE CCHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKTEKRRNLLLYGTGFDPLCKASYPLSAWHSRLQGGRGLSRQDPVRVGGTESFQARIAGP CCCCCCCCEEEEECCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHCCCH QTLQDLGNTVPGIQPFRSRWRDGALAALRLWRRLLRGSGIPFFQLQRKLLQLHVDAVHGQ HHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC HGQDRAKKLGAGSHRSTPVREQE CCHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA