| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609494
Identifier: 86609494
GI number: 86609494
Start: 2147548
End: 2148366
Strand: Direct
Name: 86609494
Synonym: CYB_2046
Alternate gene names: NA
Gene position: 2147548-2148366 (Clockwise)
Preceding gene: 86609492
Following gene: 86609496
Centisome position: 70.49
GC content: 60.2
Gene sequence:
>819_bases TTGAGGGGCAATGGGCCACAGCCGCAGCCAGTGGCGCAGTTTTTACCTCTCCGGCTAGAGCTGTTCGCAAGGCGCGGCCT CAGCCAGATTGGACGGGCAATTGGAACAGGGTTGCTGATGGCTATGCTCATAGGTGTCCCTTGCTCGGCGCGGGGGGAGA CCTTGGTGCTCAAGCAGGGAGAAGTGCGCACTCTGCCCCTGTTGCAAACCCGGGCTCGGCTGCCCTTGCAAATGGAAATG CTCTATCTGGGCATGGTCGAGGAGCGCTTCTTGAGCTACGCCCGCGCCAACAATTGGGAGACCCTTTCTAGCGACCGGGA GGATCCCCGCTGGAGCCGCTGGCAACTGCGTCCTGGGGGTGAAGCCCTTTACCTGCCCGATTCCCCTTCATCTCAGAACT CCTTGGAGCCCCCCATCTATGCCCGTGGGTTTTATGTGCAAGCCTATTTTGTCGGCGGGCGCCTGGCGGGAATGCACCTG ATTCGCAACCCTGAAGAGCCGGGCTTCAACTTGAAGGCCCTGCAAAGGCTTATCCGCGCCTGGTTTCCCGATAATCGCCT GATGTTGTATTACCAAGTGTTGCCAGAGGATCCCGAGCAGCAGGTGCTGGGCGCCTATTTGGGCACCATTCCTCCTCCCT ACCTTGCCGATATTCGGCGCAACCACGTGCCTTTTTGTCAGACTTTTTTCAGCCCCACTTTGCCCCAGCCGATCATCCCA CCCTCCGTCGATGGGCCTCCCCATTGCTTGGGCACGACTGCTGCCAACAGCGGGACGGCGCCTCACGCTGCCCAGAAAGA GACTGCGGCTATGCGCTAG
Upstream 100 bases:
>100_bases AGATTCTCGAAGAACCTTGTCTCTTTGGGTTAGGATCGGTTACTTACTACCCTGCTTTTTTGCTGTGCTGATCTCATCCT ACATTCCTGCTTCGACGGTT
Downstream 100 bases:
>100_bases TTGCAACAGTGTTGCGTAGCAATAAGGTTGTGAGGCTAAAACCATTCCCCCTCTGTGGACGAAGAGCCGGGAGTGGGGGG CCAGATTAAGTCAGCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MRGNGPQPQPVAQFLPLRLELFARRGLSQIGRAIGTGLLMAMLIGVPCSARGETLVLKQGEVRTLPLLQTRARLPLQMEM LYLGMVEERFLSYARANNWETLSSDREDPRWSRWQLRPGGEALYLPDSPSSQNSLEPPIYARGFYVQAYFVGGRLAGMHL IRNPEEPGFNLKALQRLIRAWFPDNRLMLYYQVLPEDPEQQVLGAYLGTIPPPYLADIRRNHVPFCQTFFSPTLPQPIIP PSVDGPPHCLGTTAANSGTAPHAAQKETAAMR
Sequences:
>Translated_272_residues MRGNGPQPQPVAQFLPLRLELFARRGLSQIGRAIGTGLLMAMLIGVPCSARGETLVLKQGEVRTLPLLQTRARLPLQMEM LYLGMVEERFLSYARANNWETLSSDREDPRWSRWQLRPGGEALYLPDSPSSQNSLEPPIYARGFYVQAYFVGGRLAGMHL IRNPEEPGFNLKALQRLIRAWFPDNRLMLYYQVLPEDPEQQVLGAYLGTIPPPYLADIRRNHVPFCQTFFSPTLPQPIIP PSVDGPPHCLGTTAANSGTAPHAAQKETAAMR >Mature_272_residues MRGNGPQPQPVAQFLPLRLELFARRGLSQIGRAIGTGLLMAMLIGVPCSARGETLVLKQGEVRTLPLLQTRARLPLQMEM LYLGMVEERFLSYARANNWETLSSDREDPRWSRWQLRPGGEALYLPDSPSSQNSLEPPIYARGFYVQAYFVGGRLAGMHL IRNPEEPGFNLKALQRLIRAWFPDNRLMLYYQVLPEDPEQQVLGAYLGTIPPPYLADIRRNHVPFCQTFFSPTLPQPIIP PSVDGPPHCLGTTAANSGTAPHAAQKETAAMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30431; Mature: 30431
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGNGPQPQPVAQFLPLRLELFARRGLSQIGRAIGTGLLMAMLIGVPCSARGETLVLKQG CCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC EVRTLPLLQTRARLPLQMEMLYLGMVEERFLSYARANNWETLSSDREDPRWSRWQLRPGG CCEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCC EALYLPDSPSSQNSLEPPIYARGFYVQAYFVGGRLAGMHLIRNPEEPGFNLKALQRLIRA CEEECCCCCCCCCCCCCCEEECEEEEEEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHH WFPDNRLMLYYQVLPEDPEQQVLGAYLGTIPPPYLADIRRNHVPFCQTFFSPTLPQPIIP HCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHCCCCCCCCCCC PSVDGPPHCLGTTAANSGTAPHAAQKETAAMR CCCCCCCCEEECCCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure MRGNGPQPQPVAQFLPLRLELFARRGLSQIGRAIGTGLLMAMLIGVPCSARGETLVLKQG CCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC EVRTLPLLQTRARLPLQMEMLYLGMVEERFLSYARANNWETLSSDREDPRWSRWQLRPGG CCEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCC EALYLPDSPSSQNSLEPPIYARGFYVQAYFVGGRLAGMHLIRNPEEPGFNLKALQRLIRA CEEECCCCCCCCCCCCCCEEECEEEEEEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHH WFPDNRLMLYYQVLPEDPEQQVLGAYLGTIPPPYLADIRRNHVPFCQTFFSPTLPQPIIP HCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHCCCCCCCCCCC PSVDGPPHCLGTTAANSGTAPHAAQKETAAMR CCCCCCCCEEECCCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA