Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609483

Identifier: 86609483

GI number: 86609483

Start: 2136745

End: 2137446

Strand: Direct

Name: 86609483

Synonym: CYB_2035

Alternate gene names: NA

Gene position: 2136745-2137446 (Clockwise)

Preceding gene: 86609482

Following gene: 86609484

Centisome position: 70.13

GC content: 61.25

Gene sequence:

>702_bases
ATGCACATCAGCGATGGCATTTTGCCGGCACCGCTTTGGCTAGGGGGTTATGGCATCACCGCCCTGATCACCAGCTACAG
CTTGCGGCTTCTCCGTCGCGCCAGCGTTGCGGAGCAATGTCCTTGGTGGGAACGGGATCCCCGCCATATTGCTACGCAAC
GCTGTCGCGACCAGTTGCCCAAAGCGGCTTTGCTCACGGCTGTCTTTTTTGTGGCCTCTTCGATTCACCTGCCCTTTCCC
CCGGCCAGCCTGCATCTGGTGCTGAACGGGTTGATGGGTCTGATGTTGGGGGCTTTGGCCTATCCGGCGATTGTAGTGGG
CTTGTTTTTTCAGGCGGTGGCCTTTGGCCATGGGGGCCTGACCACATTGGGCATCAACGCCGCCATTATGGGGATCCCGG
CGCTCCTGGCCGGTGGGATTTTTCGGGCAGGCCGTCGGGTGATGGGGGCCGGAGTGTCTGCCTTCTTGGCGGGAGCGGTT
GGGGTGGGTCTAGCAGTGCTGTTGTTTTACGGGGTGGTCATGGCTGCTGTGGTTGACGCTGGCAGCGGGATCCTCTCCAC
AGAAGCCGGTCGCCTGGCTCTTGGGAGCTTGGTGGTGGCCCACATCCCCCTGATGGTGGTGGAGGGGTTGTTCGCCAGTT
GGGTGGTGCTGTTTTTGCAGCGGGTACAACCGGCGCTGCTGGGAGACTATGGCAAGAGATGA

Upstream 100 bases:

>100_bases
CTGGTTACGCAGCGGTGGAGAGCCCACCGGTTTCGGGATCTCCAGGGTCAGGAATCTCAGGCTCCCAGGCTGGCTCCTCT
GCTCTGGAGTAGGACTGACC

Downstream 100 bases:

>100_bases
AGCCGGCTCAGGGATCCCTTGCTGCTGGCGCGGTCAACAATCCCATCCTCACCCCTCCAAACCCCTTTCCTGGCTGCACC
GGTGGCAACCTCTGCCCAAG

Product: cobalt transport protein CbiM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MHISDGILPAPLWLGGYGITALITSYSLRLLRRASVAEQCPWWERDPRHIATQRCRDQLPKAALLTAVFFVASSIHLPFP
PASLHLVLNGLMGLMLGALAYPAIVVGLFFQAVAFGHGGLTTLGINAAIMGIPALLAGGIFRAGRRVMGAGVSAFLAGAV
GVGLAVLLFYGVVMAAVVDAGSGILSTEAGRLALGSLVVAHIPLMVVEGLFASWVVLFLQRVQPALLGDYGKR

Sequences:

>Translated_233_residues
MHISDGILPAPLWLGGYGITALITSYSLRLLRRASVAEQCPWWERDPRHIATQRCRDQLPKAALLTAVFFVASSIHLPFP
PASLHLVLNGLMGLMLGALAYPAIVVGLFFQAVAFGHGGLTTLGINAAIMGIPALLAGGIFRAGRRVMGAGVSAFLAGAV
GVGLAVLLFYGVVMAAVVDAGSGILSTEAGRLALGSLVVAHIPLMVVEGLFASWVVLFLQRVQPALLGDYGKR
>Mature_233_residues
MHISDGILPAPLWLGGYGITALITSYSLRLLRRASVAEQCPWWERDPRHIATQRCRDQLPKAALLTAVFFVASSIHLPFP
PASLHLVLNGLMGLMLGALAYPAIVVGLFFQAVAFGHGGLTTLGINAAIMGIPALLAGGIFRAGRRVMGAGVSAFLAGAV
GVGLAVLLFYGVVMAAVVDAGSGILSTEAGRLALGSLVVAHIPLMVVEGLFASWVVLFLQRVQPALLGDYGKR

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 24377; Mature: 24377

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHISDGILPAPLWLGGYGITALITSYSLRLLRRASVAEQCPWWERDPRHIATQRCRDQLP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
KAALLTAVFFVASSIHLPFPPASLHLVLNGLMGLMLGALAYPAIVVGLFFQAVAFGHGGL
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TTLGINAAIMGIPALLAGGIFRAGRRVMGAGVSAFLAGAVGVGLAVLLFYGVVMAAVVDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GSGILSTEAGRLALGSLVVAHIPLMVVEGLFASWVVLFLQRVQPALLGDYGKR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHISDGILPAPLWLGGYGITALITSYSLRLLRRASVAEQCPWWERDPRHIATQRCRDQLP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
KAALLTAVFFVASSIHLPFPPASLHLVLNGLMGLMLGALAYPAIVVGLFFQAVAFGHGGL
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TTLGINAAIMGIPALLAGGIFRAGRRVMGAGVSAFLAGAVGVGLAVLLFYGVVMAAVVDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GSGILSTEAGRLALGSLVVAHIPLMVVEGLFASWVVLFLQRVQPALLGDYGKR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]