| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is cbiQ
Identifier: 86609484
GI number: 86609484
Start: 2137433
End: 2138263
Strand: Direct
Name: cbiQ
Synonym: CYB_2036
Alternate gene names: NA
Gene position: 2137433-2138263 (Clockwise)
Preceding gene: 86609483
Following gene: 86609485
Centisome position: 70.16
GC content: 65.46
Gene sequence:
>831_bases ATGGCAAGAGATGAAGCCGGCTCAGGGATCCCTTGCTGCTGGCGCGGTCAACAATCCCATCCTCACCCCTCCAAACCCCT TTCCTGGCTGCACCGGTGGCAACCTCTGCCCAAGGTGCTGGGCCTGATGGCGCTGATGGCGGCTTTCGCCTCGGTGAGGT GCCTGGCCCTCTTGCCGCTCATCTGGGCGCTGGTGGCTGGACTGTGGAGCCTGTCGGGATTGCCTTGGAGCCTCGGGCTG AGGCGGCTGGCAGCCCCAGGGCTGTTGGTGGCAGGGTTGATGGGGATCCTACCCTTCTGGGCGGGGGAAACCATCCTGTG GCGCTGGGGATCCCTGGCTCTGCGTTGGGAGGGGCTGCAGATGGCGCTTCGCATTGGGGGGAGAGGGCTGGCCCTATTTG CCCTCACGATGCTGCTGCTGGAGACCACTCCCACATCGGAACTGTTGGCAGCTTTGCGGGCCCTGGGGATCCCAGACCTC CTGCTGGAACTGGCCTGGCTCACCCAGCGCTATTTGCAGGAGGTGGCCGCTCAGTGGCAGCAGATGCAACGGGCAGCCCG GCTGAGGGGTTGGCGACCGCGGGGATCCCTGTGGCGTCCTGGGCCGTCTCTAAGACAAGATCTGCCCTTTCTGGCCGCTT CGGTGGGCACCCTGTTGGTTCGCAGCTACGAGCGCTCGCAGAGGGTTTATCAGGCTTTGCGCCTGCGGGGCTATGGACGG GCACCTCTGTTTTCGACGGCGGCTGGCGGGGATCCCTACAGTTGGGCGGCCACCGCGTTGGCCGTGGCTACGGCTCTATT GCTCCGCAACGCTGATGCGGCCCTCAACTAG
Upstream 100 bases:
>100_bases TTGGTGGTGGCCCACATCCCCCTGATGGTGGTGGAGGGGTTGTTCGCCAGTTGGGTGGTGCTGTTTTTGCAGCGGGTACA ACCGGCGCTGCTGGGAGACT
Downstream 100 bases:
>100_bases AATAGATAAGCCTCTGGCAAGCTGCCCCCTTTTTGATGCTCAGTCCATGAATGGGTTAGAAGCGACCGTCTCCAGTTTCC CATCCGTTAAGGACTCCGTC
Product: cobalt ABC transporter, permease protein CbiQ
Products: NA
Alternate protein names: Cobalt ABC Transporter Inner Membrane Subunit CbiQ
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MARDEAGSGIPCCWRGQQSHPHPSKPLSWLHRWQPLPKVLGLMALMAAFASVRCLALLPLIWALVAGLWSLSGLPWSLGL RRLAAPGLLVAGLMGILPFWAGETILWRWGSLALRWEGLQMALRIGGRGLALFALTMLLLETTPTSELLAALRALGIPDL LLELAWLTQRYLQEVAAQWQQMQRAARLRGWRPRGSLWRPGPSLRQDLPFLAASVGTLLVRSYERSQRVYQALRLRGYGR APLFSTAAGGDPYSWAATALAVATALLLRNADAALN
Sequences:
>Translated_276_residues MARDEAGSGIPCCWRGQQSHPHPSKPLSWLHRWQPLPKVLGLMALMAAFASVRCLALLPLIWALVAGLWSLSGLPWSLGL RRLAAPGLLVAGLMGILPFWAGETILWRWGSLALRWEGLQMALRIGGRGLALFALTMLLLETTPTSELLAALRALGIPDL LLELAWLTQRYLQEVAAQWQQMQRAARLRGWRPRGSLWRPGPSLRQDLPFLAASVGTLLVRSYERSQRVYQALRLRGYGR APLFSTAAGGDPYSWAATALAVATALLLRNADAALN >Mature_275_residues ARDEAGSGIPCCWRGQQSHPHPSKPLSWLHRWQPLPKVLGLMALMAAFASVRCLALLPLIWALVAGLWSLSGLPWSLGLR RLAAPGLLVAGLMGILPFWAGETILWRWGSLALRWEGLQMALRIGGRGLALFALTMLLLETTPTSELLAALRALGIPDLL LELAWLTQRYLQEVAAQWQQMQRAARLRGWRPRGSLWRPGPSLRQDLPFLAASVGTLLVRSYERSQRVYQALRLRGYGRA PLFSTAAGGDPYSWAATALAVATALLLRNADAALN
Specific function: Unknown
COG id: COG0619
COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30352; Mature: 30221
Theoretical pI: Translated: 11.79; Mature: 11.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARDEAGSGIPCCWRGQQSHPHPSKPLSWLHRWQPLPKVLGLMALMAAFASVRCLALLPL CCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH IWALVAGLWSLSGLPWSLGLRRLAAPGLLVAGLMGILPFWAGETILWRWGSLALRWEGLQ HHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHEEECCCHHEEHHHHH MALRIGGRGLALFALTMLLLETTPTSELLAALRALGIPDLLLELAWLTQRYLQEVAAQWQ HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH QMQRAARLRGWRPRGSLWRPGPSLRQDLPFLAASVGTLLVRSYERSQRVYQALRLRGYGR HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC APLFSTAAGGDPYSWAATALAVATALLLRNADAALN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCC >Mature Secondary Structure ARDEAGSGIPCCWRGQQSHPHPSKPLSWLHRWQPLPKVLGLMALMAAFASVRCLALLPL CCCCCCCCCCCEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH IWALVAGLWSLSGLPWSLGLRRLAAPGLLVAGLMGILPFWAGETILWRWGSLALRWEGLQ HHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHEEECCCHHEEHHHHH MALRIGGRGLALFALTMLLLETTPTSELLAALRALGIPDLLLELAWLTQRYLQEVAAQWQ HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH QMQRAARLRGWRPRGSLWRPGPSLRQDLPFLAASVGTLLVRSYERSQRVYQALRLRGYGR HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC APLFSTAAGGDPYSWAATALAVATALLLRNADAALN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA