| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609447
Identifier: 86609447
GI number: 86609447
Start: 2104909
End: 2105127
Strand: Direct
Name: 86609447
Synonym: CYB_1998
Alternate gene names: NA
Gene position: 2104909-2105127 (Clockwise)
Preceding gene: 86609442
Following gene: 86609448
Centisome position: 69.09
GC content: 56.16
Gene sequence:
>219_bases ATGCAATCGTCTCCCAGAATCCCTTCTCGTCTGGACTCCGCTTCTGTTGCCCAGTACTACGACACCACCAACGACTGGAT CCCAGGCTGGACAGAGCAAGCGGAGCGTTGGAATGGACGCTTGGCCATGTTGGGCTTGGTGATCAGCATTGCTACAGAAG CGGTGCTGGGCCACAGTGTTTTTGCCAGCACTCTCGCCCAGTGGCTAGGTCTGCAATAA
Upstream 100 bases:
>100_bases CGGCCAGGGATCCCTTCCGCCCTGACCTGAAAGCGAAGCTTGTCACAAAATGTAACTTTGTGTTAAGTTTGGTTACAGCA ACCAATACGAGGTATTAGTA
Downstream 100 bases:
>100_bases CCTGCAATAATCTGTCAAAGATCTTTTCGGTAGAGCCACATCGGGCATCTCAGAGAGTTTCTCTTCGGCTTTGAGATGTT ATGGCTCTACCCTTTCATCC
Product: CAB/ELIP/HLIP family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MQSSPRIPSRLDSASVAQYYDTTNDWIPGWTEQAERWNGRLAMLGLVISIATEAVLGHSVFASTLAQWLGLQ
Sequences:
>Translated_72_residues MQSSPRIPSRLDSASVAQYYDTTNDWIPGWTEQAERWNGRLAMLGLVISIATEAVLGHSVFASTLAQWLGLQ >Mature_72_residues MQSSPRIPSRLDSASVAQYYDTTNDWIPGWTEQAERWNGRLAMLGLVISIATEAVLGHSVFASTLAQWLGLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7964; Mature: 7964
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSSPRIPSRLDSASVAQYYDTTNDWIPGWTEQAERWNGRLAMLGLVISIATEAVLGHSV CCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH FASTLAQWLGLQ HHHHHHHHHCCC >Mature Secondary Structure MQSSPRIPSRLDSASVAQYYDTTNDWIPGWTEQAERWNGRLAMLGLVISIATEAVLGHSV CCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH FASTLAQWLGLQ HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA