Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609416

Identifier: 86609416

GI number: 86609416

Start: 2062532

End: 2063101

Strand: Reverse

Name: 86609416

Synonym: CYB_1966

Alternate gene names: NA

Gene position: 2063101-2062532 (Counterclockwise)

Preceding gene: 86609417

Following gene: 86609413

Centisome position: 67.72

GC content: 62.11

Gene sequence:

>570_bases
ATGAGGAAACAAGCCCTTTTGCCAAGCTTCCTGGGCATTGCCGTTGCGGTTCTGCTGGGATCCGGGCCTGCCTATGCTCA
GTTGCGGCTGATCCCCGAAGCGGCGCGGCGGGTGTACGAGGCATTGCCGGATCTGCCGCTGGAAAACACCTACACCCCTA
TTAACCCCAACGATGGCGGCCCCGCACCTGAAGAGGATACTTTGGTGCGGCGAATGATGATCTATCACCTGCAGGTGGCC
GGTCGCTCCCCCACCGACCGCTTTGACTGGCAACTGACGCTGGCAGACTATTTCGATGCCAACGAGCCAATCATCGCCCA
ACGGTATCCCGGTGCCGACCGCCTCACGGTCAACCCCTACGCCCAAGACAAGGCAGCTGTGCAAGCCCTGAACCGGCAAC
AGCGACAGGCCCTGCTGGAAGCCCTTGTGCTGGCCTTCGGTGGGGATCCCGACCCCAAACCCCTCTACATTCCCGCCGAC
TTGAATCCTGTCCCCGCCCTACCCACCCCAGAACCCATGCAACCTTTGCTGCTCCCTGGTAGCGGAGGGGCTGAGCTGCT
CAGGCCCTAG

Upstream 100 bases:

>100_bases
GCCTGATCTCAATCGCTGAATCTGCCAAATCTACAATCCGAAACCACTGCTTGATTGCAATACAATTCATTTCACAGAAA
CAAGTTTTGGGGCGAGCAGG

Downstream 100 bases:

>100_bases
CCGAGGTTTCCCGCTAACTCAAGGCTTGCCCGGTGTAGTTCTCAATGCAGCGCAGGAACAGCTCTACCCCAATGCCAAGG
GCAGCCTCATCGAAGTCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MRKQALLPSFLGIAVAVLLGSGPAYAQLRLIPEAARRVYEALPDLPLENTYTPINPNDGGPAPEEDTLVRRMMIYHLQVA
GRSPTDRFDWQLTLADYFDANEPIIAQRYPGADRLTVNPYAQDKAAVQALNRQQRQALLEALVLAFGGDPDPKPLYIPAD
LNPVPALPTPEPMQPLLLPGSGGAELLRP

Sequences:

>Translated_189_residues
MRKQALLPSFLGIAVAVLLGSGPAYAQLRLIPEAARRVYEALPDLPLENTYTPINPNDGGPAPEEDTLVRRMMIYHLQVA
GRSPTDRFDWQLTLADYFDANEPIIAQRYPGADRLTVNPYAQDKAAVQALNRQQRQALLEALVLAFGGDPDPKPLYIPAD
LNPVPALPTPEPMQPLLLPGSGGAELLRP
>Mature_189_residues
MRKQALLPSFLGIAVAVLLGSGPAYAQLRLIPEAARRVYEALPDLPLENTYTPINPNDGGPAPEEDTLVRRMMIYHLQVA
GRSPTDRFDWQLTLADYFDANEPIIAQRYPGADRLTVNPYAQDKAAVQALNRQQRQALLEALVLAFGGDPDPKPLYIPAD
LNPVPALPTPEPMQPLLLPGSGGAELLRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20654; Mature: 20654

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKQALLPSFLGIAVAVLLGSGPAYAQLRLIPEAARRVYEALPDLPLENTYTPINPNDGG
CCCCHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PAPEEDTLVRRMMIYHLQVAGRSPTDRFDWQLTLADYFDANEPIIAQRYPGADRLTVNPY
CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHCCCCCCEEEECCCCCCCEEECCC
AQDKAAVQALNRQQRQALLEALVLAFGGDPDPKPLYIPADLNPVPALPTPEPMQPLLLPG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEECC
SGGAELLRP
CCCHHCCCC
>Mature Secondary Structure
MRKQALLPSFLGIAVAVLLGSGPAYAQLRLIPEAARRVYEALPDLPLENTYTPINPNDGG
CCCCHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PAPEEDTLVRRMMIYHLQVAGRSPTDRFDWQLTLADYFDANEPIIAQRYPGADRLTVNPY
CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHCCCCCCEEEECCCCCCCEEECCC
AQDKAAVQALNRQQRQALLEALVLAFGGDPDPKPLYIPADLNPVPALPTPEPMQPLLLPG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEECC
SGGAELLRP
CCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA