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The map label for this gene is recA [H]

Identifier: 86609411

GI number: 86609411

Start: 2056922

End: 2057998

Strand: Direct

Name: recA [H]

Synonym: CYB_1961

Alternate gene names: 86609411

Gene position: 2056922-2057998 (Clockwise)

Preceding gene: 86609408

Following gene: 86609414

Centisome position: 67.51

GC content: 56.27

Gene sequence:

>1077_bases
TTGAAGTCAGAAAAACGCAAAGCCCTGGAGCAGGTGTTAAGCCAGATCGAGCGGAATTTCGGCAAAGGGGCAATCATGCG
CCTGGGAGATGCCACCCAGATGCGGGTGGAGACCATACCCAGTGGGGCCATCACCCTCGACTTGGCCTTGGGCGGAGGTT
ACCCAAAAGGGCGGATTATCGAAGTCTTTGGGCCGGAATCTTCTGGGAAAACTTCAATTGCCCTACATGCCATCGCCGAA
GTGCAAAAACAAGGGGGAACGGCAGCTTTTGTGGATGCGGAACATGCGCTGGATCCCACTTACGCAGCAGCTTTGGGGGT
TGATATTCAAAACCTGTTGATCTCCCAGCCGGACACGGGGGAGGCCGCCCTGGAGATCGTCGATCAGTTGGTGCGCTCTG
CGGCTGTGGATATTGTGGTGGTGGATTCGGTGGCAGCGTTGGTGCCCCGTGCCGAGATCGAGGGGGATATGGGAGACGCC
CATGTGGGATTGCAGGCCCGCCTGATGAGCCAAGCGCTGCGCAAGATTGCCGGAAATGTCAGCAAAACCGGATCCATCGT
TCTTTTCTTAAACCAATTGCGCTCCAAAATTGGCGGCATAGGCTATGGCCCCCAGGAGACCACCACCGGCGGCAATGCCC
TTAAGTTTTATGCGTCGGTGCGGCTGGATATTCGCCGCGTTCAAACCCTGAAAAAAGGTGCGGAAGAATACGGGATCCGA
GCGCGGGTCAAGGTGGTGAAAAACAAAGTTGCCCCCCCTTTCCGGCGGGCAGAATTTGACATCATTTTCGGCCAAGGGAT
CTCCAACATCGGCTGCATCATCGATCTGGCAGATGAGATGGGCATTCTCAAGCGGCGCGGCTCTTGGTACAGCTACAAGG
AGGAAAATGTTGCCCAAGGAAGGGACAATCTGGTTGTCTACTTGAAGGAAAACCCAGAGCTCCTAGCGGAGGTGGAAGCG
GCTGTGCGGGAGAAACTTTCTGCGGGGGTGACGGTTTCCGCCAGCCGGCCGGCAGCGATGGAGGAGGGAGAGCAGGAAGA
GAATGAGGATGCGGTCTTTGTAGAGGAAGAGTTTTGA

Upstream 100 bases:

>100_bases
GTTAGAATGCAGGCTCGATTTTCCACCACGACTCCTGGGGGGGATGCGGGTTATGGCCCGGAAAGCCGTTGCTGTGAACA
CTGCTGATGACTCGGACAAA

Downstream 100 bases:

>100_bases
GGGAGCAGCTAGCTGTTCAGGGAGCGCTTCCTGAGCGAGATCGCCGCTGGCGCAGGGCCTCGTAGAGCAACAACCCCCCC
GTCATAGCGACGTTCAGAGA

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MKSEKRKALEQVLSQIERNFGKGAIMRLGDATQMRVETIPSGAITLDLALGGGYPKGRIIEVFGPESSGKTSIALHAIAE
VQKQGGTAAFVDAEHALDPTYAAALGVDIQNLLISQPDTGEAALEIVDQLVRSAAVDIVVVDSVAALVPRAEIEGDMGDA
HVGLQARLMSQALRKIAGNVSKTGSIVLFLNQLRSKIGGIGYGPQETTTGGNALKFYASVRLDIRRVQTLKKGAEEYGIR
ARVKVVKNKVAPPFRRAEFDIIFGQGISNIGCIIDLADEMGILKRRGSWYSYKEENVAQGRDNLVVYLKENPELLAEVEA
AVREKLSAGVTVSASRPAAMEEGEQEENEDAVFVEEEF

Sequences:

>Translated_358_residues
MKSEKRKALEQVLSQIERNFGKGAIMRLGDATQMRVETIPSGAITLDLALGGGYPKGRIIEVFGPESSGKTSIALHAIAE
VQKQGGTAAFVDAEHALDPTYAAALGVDIQNLLISQPDTGEAALEIVDQLVRSAAVDIVVVDSVAALVPRAEIEGDMGDA
HVGLQARLMSQALRKIAGNVSKTGSIVLFLNQLRSKIGGIGYGPQETTTGGNALKFYASVRLDIRRVQTLKKGAEEYGIR
ARVKVVKNKVAPPFRRAEFDIIFGQGISNIGCIIDLADEMGILKRRGSWYSYKEENVAQGRDNLVVYLKENPELLAEVEA
AVREKLSAGVTVSASRPAAMEEGEQEENEDAVFVEEEF
>Mature_358_residues
MKSEKRKALEQVLSQIERNFGKGAIMRLGDATQMRVETIPSGAITLDLALGGGYPKGRIIEVFGPESSGKTSIALHAIAE
VQKQGGTAAFVDAEHALDPTYAAALGVDIQNLLISQPDTGEAALEIVDQLVRSAAVDIVVVDSVAALVPRAEIEGDMGDA
HVGLQARLMSQALRKIAGNVSKTGSIVLFLNQLRSKIGGIGYGPQETTTGGNALKFYASVRLDIRRVQTLKKGAEEYGIR
ARVKVVKNKVAPPFRRAEFDIIFGQGISNIGCIIDLADEMGILKRRGSWYSYKEENVAQGRDNLVVYLKENPELLAEVEA
AVREKLSAGVTVSASRPAAMEEGEQEENEDAVFVEEEF

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=347, Percent_Identity=56.7723342939481, Blast_Score=404, Evalue=1e-114,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 38552; Mature: 38552

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSEKRKALEQVLSQIERNFGKGAIMRLGDATQMRVETIPSGAITLDLALGGGYPKGRII
CCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCEEE
EVFGPESSGKTSIALHAIAEVQKQGGTAAFVDAEHALDPTYAAALGVDIQNLLISQPDTG
EEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEHHHCCCCHHHHHHCCCHHHHHCCCCCCC
EAALEIVDQLVRSAAVDIVVVDSVAALVPRAEIEGDMGDAHVGLQARLMSQALRKIAGNV
HHHHHHHHHHHHHHHCCEEEECHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
SKTGSIVLFLNQLRSKIGGIGYGPQETTTGGNALKFYASVRLDIRRVQTLKKGAEEYGIR
CCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCH
ARVKVVKNKVAPPFRRAEFDIIFGQGISNIGCIIDLADEMGILKRRGSWYSYKEENVAQG
HHHHHHHHHCCCCHHHCEEEEEECCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCHHHCC
RDNLVVYLKENPELLAEVEAAVREKLSAGVTVSASRPAAMEEGEQEENEDAVFVEEEF
CCCEEEEECCCCHHHHHHHHHHHHHHHCCEEEECCCCCHHHCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MKSEKRKALEQVLSQIERNFGKGAIMRLGDATQMRVETIPSGAITLDLALGGGYPKGRII
CCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCEEE
EVFGPESSGKTSIALHAIAEVQKQGGTAAFVDAEHALDPTYAAALGVDIQNLLISQPDTG
EEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEHHHCCCCHHHHHHCCCHHHHHCCCCCCC
EAALEIVDQLVRSAAVDIVVVDSVAALVPRAEIEGDMGDAHVGLQARLMSQALRKIAGNV
HHHHHHHHHHHHHHHCCEEEECHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
SKTGSIVLFLNQLRSKIGGIGYGPQETTTGGNALKFYASVRLDIRRVQTLKKGAEEYGIR
CCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCH
ARVKVVKNKVAPPFRRAEFDIIFGQGISNIGCIIDLADEMGILKRRGSWYSYKEENVAQG
HHHHHHHHHCCCCHHHCEEEEEECCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCHHHCC
RDNLVVYLKENPELLAEVEAAVREKLSAGVTVSASRPAAMEEGEQEENEDAVFVEEEF
CCCEEEEECCCCHHHHHHHHHHHHHHHCCEEEECCCCCHHHCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12240834 [H]