| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is hisA [H]
Identifier: 86609414
GI number: 86609414
Start: 2060409
End: 2061194
Strand: Direct
Name: hisA [H]
Synonym: CYB_1964
Alternate gene names: 86609414
Gene position: 2060409-2061194 (Clockwise)
Preceding gene: 86609411
Following gene: 86609415
Centisome position: 67.63
GC content: 63.1
Gene sequence:
>786_bases ATGCCTTACACCAGCGCCTTCTTAGAGGTGATCCCCGCCATCGACCTTTTGCAGGGCCGCGCCGTGCGCCTTTACCAGGG GGATTACGCCCAGGCAGAACAGGTAGCCGACGACCCGATCCAACAGGCCGAAGCTTGGGCGGCACAGGGTGCTCCTCGCC TGCATGTGGTGGATTTGGACGGGGCCAAAAGCGGGGATCCAGTCAACCTGCCCATCATTGAGCGCATTGTCCGCAGCCTG GCCATCCCGGTGCAGGTGGGGGGTGGGATCCGATCCCTTGAACGGGCGCGGCAGTTGTTGGATTTGGGGGTGGATCGGGT GATCGTTGGCACCCTAGCCGTAGAGGATCCCGACACCCTGGAGGCTATGACCCAAGCCTTCCCCGGTCGGGTTTGGGTGG GGATCGACGCTCGGCAAGGGCAGGTGGCCACCCGCGGCTGGCTGAGCACCACTCCCCTGCGGGCTCCTGAGCTAGTGCAA CGGGTGCAAGCCCAAGGAGCTGCCGGGATCATCTATACCGACATTAGCCGGGATGGCACCCTGGCCGGGCCCAATTTAGA ACAGCTGCGCCAGATTCTAGCCGTCTCTCAAGTGCCTGTAATTGCTTCGGGAGGGATCGGCTCGCTGACCGATTTGCTGG CTTTGTTGAGCTTGCCCCGTTTGACAGGGGCCATTTTGGGCAAGGCCCTCTACTCAGGGGCGATCTCCTTGCAGGAAGCT TTGCGAGCAGTGGGGCCGGGCCGCTGGCAAGATCTACCGCCGGAAACCGGATCCCTGTGGGCCTAG
Upstream 100 bases:
>100_bases GTCAGCGGTGTGGAGCACTTTAGGGTCTAGAGATCCAGATCTCCGCTGGAGCAAGGCCGCTCCCAGGCGATACTGGAGAA GCCCCTAAGGGATCCCAATC
Downstream 100 bases:
>100_bases GTATCCATCCAGAGATCGAGCGAAAGACAGCCCTGGCAAAACCTCTGCCATACTGGTGAAATCAACAGGCAACTTCATGC GACAACACCAGCCGCTGGTG
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [H]
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MPYTSAFLEVIPAIDLLQGRAVRLYQGDYAQAEQVADDPIQQAEAWAAQGAPRLHVVDLDGAKSGDPVNLPIIERIVRSL AIPVQVGGGIRSLERARQLLDLGVDRVIVGTLAVEDPDTLEAMTQAFPGRVWVGIDARQGQVATRGWLSTTPLRAPELVQ RVQAQGAAGIIYTDISRDGTLAGPNLEQLRQILAVSQVPVIASGGIGSLTDLLALLSLPRLTGAILGKALYSGAISLQEA LRAVGPGRWQDLPPETGSLWA
Sequences:
>Translated_261_residues MPYTSAFLEVIPAIDLLQGRAVRLYQGDYAQAEQVADDPIQQAEAWAAQGAPRLHVVDLDGAKSGDPVNLPIIERIVRSL AIPVQVGGGIRSLERARQLLDLGVDRVIVGTLAVEDPDTLEAMTQAFPGRVWVGIDARQGQVATRGWLSTTPLRAPELVQ RVQAQGAAGIIYTDISRDGTLAGPNLEQLRQILAVSQVPVIASGGIGSLTDLLALLSLPRLTGAILGKALYSGAISLQEA LRAVGPGRWQDLPPETGSLWA >Mature_260_residues PYTSAFLEVIPAIDLLQGRAVRLYQGDYAQAEQVADDPIQQAEAWAAQGAPRLHVVDLDGAKSGDPVNLPIIERIVRSLA IPVQVGGGIRSLERARQLLDLGVDRVIVGTLAVEDPDTLEAMTQAFPGRVWVGIDARQGQVATRGWLSTTPLRAPELVQR VQAQGAAGIIYTDISRDGTLAGPNLEQLRQILAVSQVPVIASGGIGSLTDLLALLSLPRLTGAILGKALYSGAISLQEAL RAVGPGRWQDLPPETGSLWA
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI87082028, Length=249, Percent_Identity=39.7590361445783, Blast_Score=157, Evalue=7e-40, Organism=Escherichia coli, GI1788336, Length=241, Percent_Identity=28.2157676348548, Blast_Score=100, Evalue=8e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: =5.3.1.16 [H]
Molecular weight: Translated: 27683; Mature: 27552
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYTSAFLEVIPAIDLLQGRAVRLYQGDYAQAEQVADDPIQQAEAWAAQGAPRLHVVDLD CCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECC GAKSGDPVNLPIIERIVRSLAIPVQVGGGIRSLERARQLLDLGVDRVIVGTLAVEDPDTL CCCCCCCCCCHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHCHHHEEEEEEECCCCHHH EAMTQAFPGRVWVGIDARQGQVATRGWLSTTPLRAPELVQRVQAQGAAGIIYTDISRDGT HHHHHHCCCEEEEEEECCCCCCHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCC LAGPNLEQLRQILAVSQVPVIASGGIGSLTDLLALLSLPRLTGAILGKALYSGAISLQEA CCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRAVGPGRWQDLPPETGSLWA HHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure PYTSAFLEVIPAIDLLQGRAVRLYQGDYAQAEQVADDPIQQAEAWAAQGAPRLHVVDLD CHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECC GAKSGDPVNLPIIERIVRSLAIPVQVGGGIRSLERARQLLDLGVDRVIVGTLAVEDPDTL CCCCCCCCCCHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHCHHHEEEEEEECCCCHHH EAMTQAFPGRVWVGIDARQGQVATRGWLSTTPLRAPELVQRVQAQGAAGIIYTDISRDGT HHHHHHCCCEEEEEEECCCCCCHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCC LAGPNLEQLRQILAVSQVPVIASGGIGSLTDLLALLSLPRLTGAILGKALYSGAISLQEA CCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRAVGPGRWQDLPPETGSLWA HHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA