Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609407

Identifier: 86609407

GI number: 86609407

Start: 2046848

End: 2047522

Strand: Direct

Name: 86609407

Synonym: CYB_1951

Alternate gene names: NA

Gene position: 2046848-2047522 (Clockwise)

Preceding gene: 86609406

Following gene: 86609408

Centisome position: 67.18

GC content: 60.15

Gene sequence:

>675_bases
GTGGCCGAAGAGTTGGAGTCTGCCCGTCAGCAGGTAAGCCTGCTTTCCTCGGAAAACCAGCACCTGCGCGCTCTGCATCA
GCAGTTGTCTGGAGAGCTCGCTGCCATCACCCGAGAGTTCCAGGGGCAATTGGGCCACACCCTGAAGCGCCTGCAGCAAA
TCAGCCTACGGCTTGCTGACGCAAATGGCCAGGCTGCCCAAGTTGCTGCAGCTTCTGAAGCCTCTTTCCAACAGAACAGC
CCGACTGCCAATCCCGGCCAACCGGAAGCCCCTCCCAGCTACGATTTTTTGAATCGCCTCAAGCGCCGACAGGCCCGCAA
CGAGACCCCCTCCTTCTCATCCAACGGCTTTGCCCCGTCCTCCTTTGATTCCCTTCGCCACCCTTCCACCCACACCTCTG
CCGAGCCCTACCCCCGCACTGGCTACCAGGTTCCTTCCCTGGACGAGTTGATGCAGGATAGGGGCGGCCCGGATCCCTAT
CTCGGCGAGGCAGACTCCTCAGCCTATTCCACCGGCATTTATCAGCGGGTACGGGAGCAACATCACGGATCCCAGGGCTC
TGCCGTACTTTGGATGGCCGCTGCAGTCGTCTTAGTCATTGGATCGTTTGGGTTGGGATTTGTAGCCGTACAGCCGTTTT
TGCGCAACAACCCACCGCCCGTGCAAGCACCCTGA

Upstream 100 bases:

>100_bases
CTCTGGCGCTCGCAACAGCAACGGTAACCCCAGTGGCTTTCGCTCCCCTGCCGCAATGGAGACGGGGCCAGGGGTGGTGC
CGATTCAGGTGTATCAACAA

Downstream 100 bases:

>100_bases
GAGCTATTCACAGGATGCTCCAAAAGCCCGCTGGCGGGGTTAGGATGCCCCCAATGCGCTCCGCACCACTGACGAATGAC
CAGGGGTTATATCTGTGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MAEELESARQQVSLLSSENQHLRALHQQLSGELAAITREFQGQLGHTLKRLQQISLRLADANGQAAQVAAASEASFQQNS
PTANPGQPEAPPSYDFLNRLKRRQARNETPSFSSNGFAPSSFDSLRHPSTHTSAEPYPRTGYQVPSLDELMQDRGGPDPY
LGEADSSAYSTGIYQRVREQHHGSQGSAVLWMAAAVVLVIGSFGLGFVAVQPFLRNNPPPVQAP

Sequences:

>Translated_224_residues
MAEELESARQQVSLLSSENQHLRALHQQLSGELAAITREFQGQLGHTLKRLQQISLRLADANGQAAQVAAASEASFQQNS
PTANPGQPEAPPSYDFLNRLKRRQARNETPSFSSNGFAPSSFDSLRHPSTHTSAEPYPRTGYQVPSLDELMQDRGGPDPY
LGEADSSAYSTGIYQRVREQHHGSQGSAVLWMAAAVVLVIGSFGLGFVAVQPFLRNNPPPVQAP
>Mature_223_residues
AEELESARQQVSLLSSENQHLRALHQQLSGELAAITREFQGQLGHTLKRLQQISLRLADANGQAAQVAAASEASFQQNSP
TANPGQPEAPPSYDFLNRLKRRQARNETPSFSSNGFAPSSFDSLRHPSTHTSAEPYPRTGYQVPSLDELMQDRGGPDPYL
GEADSSAYSTGIYQRVREQHHGSQGSAVLWMAAAVVLVIGSFGLGFVAVQPFLRNNPPPVQAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24318; Mature: 24187

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEELESARQQVSLLSSENQHLRALHQQLSGELAAITREFQGQLGHTLKRLQQISLRLAD
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ANGQAAQVAAASEASFQQNSPTANPGQPEAPPSYDFLNRLKRRQARNETPSFSSNGFAPS
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
SFDSLRHPSTHTSAEPYPRTGYQVPSLDELMQDRGGPDPYLGEADSSAYSTGIYQRVREQ
CHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
HHGSQGSAVLWMAAAVVLVIGSFGLGFVAVQPFLRNNPPPVQAP
HCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AEELESARQQVSLLSSENQHLRALHQQLSGELAAITREFQGQLGHTLKRLQQISLRLAD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ANGQAAQVAAASEASFQQNSPTANPGQPEAPPSYDFLNRLKRRQARNETPSFSSNGFAPS
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
SFDSLRHPSTHTSAEPYPRTGYQVPSLDELMQDRGGPDPYLGEADSSAYSTGIYQRVREQ
CHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
HHGSQGSAVLWMAAAVVLVIGSFGLGFVAVQPFLRNNPPPVQAP
HCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA