Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609382

Identifier: 86609382

GI number: 86609382

Start: 2010830

End: 2011297

Strand: Reverse

Name: 86609382

Synonym: CYB_1926

Alternate gene names: NA

Gene position: 2011297-2010830 (Counterclockwise)

Preceding gene: 86609383

Following gene: 86609381

Centisome position: 66.02

GC content: 55.98

Gene sequence:

>468_bases
GTGGATCCAGAAAGCCTCTATGAGAAGGATTTCTATGCTTGGACTCAGCAACAAGCTCAATTTCTGCGGGAGCGGGCTTG
GGAGAAGCTAGACCTGCCCCATTTGATTGAGGAGATGGAATCGTTGGGCAGGCAACAGCGGCAAGAGCTGCGCAACCGGC
TGGGGGTTTTGGTGGGGCACCTCCTGAAATGGGAGTATCAGCCGCAGGCTAGATCTGTAAGCTGGCTTCTCACCCTACAG
GTGCAGCGGCAGGAAGTTCTGGATCTGCTGGAGGAAAGCCCAAGACTGAGGCCCTATTTGCCGGAGGCCATCGCCAAGTC
TTACCTGAGGGCGCTCCAGCTAGCCCTGGAAGAGACCAAGCTGCCCAGAAAGACTTTTCCCAAGACGTGTCCTTACGCTC
CCGAGCAAATCCTGGATAGCCAGTTTTACCCTGGCGAGCCCAGCAGGTTGCTTGAGGAAGAAGGTTAG

Upstream 100 bases:

>100_bases
TAGTGGGGCAAACCCTCTTGGGTGGGAGAGCCTGGCTGTAAAGCCTGCGGGGCTAGCTAGACTTCTCTGAGCTGGCGGGT
CAGAAGGGGGAGGGTTGAGA

Downstream 100 bases:

>100_bases
TTACCCGAGGAGGAAACCAATGACTGTAGCCCGACAAAATCCTACGCCTTCCGCTCAGCAGGAACGGGATCCCCGTCTCA
AGGAGATCGATGCCCTGACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MDPESLYEKDFYAWTQQQAQFLRERAWEKLDLPHLIEEMESLGRQQRQELRNRLGVLVGHLLKWEYQPQARSVSWLLTLQ
VQRQEVLDLLEESPRLRPYLPEAIAKSYLRALQLALEETKLPRKTFPKTCPYAPEQILDSQFYPGEPSRLLEEEG

Sequences:

>Translated_155_residues
MDPESLYEKDFYAWTQQQAQFLRERAWEKLDLPHLIEEMESLGRQQRQELRNRLGVLVGHLLKWEYQPQARSVSWLLTLQ
VQRQEVLDLLEESPRLRPYLPEAIAKSYLRALQLALEETKLPRKTFPKTCPYAPEQILDSQFYPGEPSRLLEEEG
>Mature_155_residues
MDPESLYEKDFYAWTQQQAQFLRERAWEKLDLPHLIEEMESLGRQQRQELRNRLGVLVGHLLKWEYQPQARSVSWLLTLQ
VQRQEVLDLLEESPRLRPYLPEAIAKSYLRALQLALEETKLPRKTFPKTCPYAPEQILDSQFYPGEPSRLLEEEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18438; Mature: 18438

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPESLYEKDFYAWTQQQAQFLRERAWEKLDLPHLIEEMESLGRQQRQELRNRLGVLVGH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKWEYQPQARSVSWLLTLQVQRQEVLDLLEESPRLRPYLPEAIAKSYLRALQLALEETK
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
LPRKTFPKTCPYAPEQILDSQFYPGEPSRLLEEEG
CCHHCCCCCCCCCHHHHHCCCCCCCCHHHHHCCCC
>Mature Secondary Structure
MDPESLYEKDFYAWTQQQAQFLRERAWEKLDLPHLIEEMESLGRQQRQELRNRLGVLVGH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKWEYQPQARSVSWLLTLQVQRQEVLDLLEESPRLRPYLPEAIAKSYLRALQLALEETK
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
LPRKTFPKTCPYAPEQILDSQFYPGEPSRLLEEEG
CCHHCCCCCCCCCHHHHHCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA