| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is blh [H]
Identifier: 86609383
GI number: 86609383
Start: 2011395
End: 2012111
Strand: Reverse
Name: blh [H]
Synonym: CYB_1927
Alternate gene names: 86609383
Gene position: 2012111-2011395 (Counterclockwise)
Preceding gene: 86609385
Following gene: 86609382
Centisome position: 66.04
GC content: 59.69
Gene sequence:
>717_bases ATGCTATTTCGCCAACTGTTCGACGCAGAAACAAGCACCTACACCTATTTAATCGCGGATCCGGCAACCCGCGAGGCCGC CCTGGTGGATCCGGTACTGGAGCAGGTGGAGCGGGATTTGAAGTTGATTCGGGAATTGGGTCTAACCTTGAAGTACTGCC TGGAAACCCACGTTCACGCGGATCACATCACGGGAACCGGGAAGCTGCGGGAACTGACCGGTTGCCAAGGGGTGGTGCCG GTACAGGCTAAGGCTCAGTGTGCAGATCGTTTCATCGGTCATGGGGAAACGCTGCAAGTGGGATCCGTCGTCATTGAAGC CATCGCTACCCTGGGCCACACCGACAGCCACATGACCTACCGCGTGAATGGGGATCGCGTCCTTACCGGAGATGCCCTGC TGATCCGCGGCTGTGGGCGCACGGATTTCCAAAGCGGGGATCCCGGCCTGATGTACGACCATGTTACCCAGCACTTGTTT ACGCTGCCCGATGAGACGCTGGTCTATCCTGGCCACGACTATCGCGGGCACACCGTCTCCACCATTGGCGAGGAGAAGCG CTGGAACCCGCGCTTTGTGGATCCGGAAACGGGCAACCTGCGTTCCCGTGAGAGCTTCATTGCCCTCATGAACAGCCTCA ACCTGCCCCAGCCGAAGAAGATCCAGGAAGCGGTGCCGGCCAACGAGCAGTGCGGCCAAGTGGCAGCCGCGGTTTAG
Upstream 100 bases:
>100_bases GTTCGTCAACTTGATTTTAATTTTAACACTAGATAGTTATATAGTGTTCCTAGAAAGCCCAAGTTCACGTCGGGCTTTCG ATACCAGACAGGAGGGCACT
Downstream 100 bases:
>100_bases TGGGGCAAACCCTCTTGGGTGGGAGAGCCTGGCTGTAAAGCCTGCGGGGCTAGCTAGACTTCTCTGAGCTGGCGGGTCAG AAGGGGGAGGGTTGAGAGTG
Product: metallo-beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MLFRQLFDAETSTYTYLIADPATREAALVDPVLEQVERDLKLIRELGLTLKYCLETHVHADHITGTGKLRELTGCQGVVP VQAKAQCADRFIGHGETLQVGSVVIEAIATLGHTDSHMTYRVNGDRVLTGDALLIRGCGRTDFQSGDPGLMYDHVTQHLF TLPDETLVYPGHDYRGHTVSTIGEEKRWNPRFVDPETGNLRSRESFIALMNSLNLPQPKKIQEAVPANEQCGQVAAAV
Sequences:
>Translated_238_residues MLFRQLFDAETSTYTYLIADPATREAALVDPVLEQVERDLKLIRELGLTLKYCLETHVHADHITGTGKLRELTGCQGVVP VQAKAQCADRFIGHGETLQVGSVVIEAIATLGHTDSHMTYRVNGDRVLTGDALLIRGCGRTDFQSGDPGLMYDHVTQHLF TLPDETLVYPGHDYRGHTVSTIGEEKRWNPRFVDPETGNLRSRESFIALMNSLNLPQPKKIQEAVPANEQCGQVAAAV >Mature_238_residues MLFRQLFDAETSTYTYLIADPATREAALVDPVLEQVERDLKLIRELGLTLKYCLETHVHADHITGTGKLRELTGCQGVVP VQAKAQCADRFIGHGETLQVGSVVIEAIATLGHTDSHMTYRVNGDRVLTGDALLIRGCGRTDFQSGDPGLMYDHVTQHLF TLPDETLVYPGHDYRGHTVSTIGEEKRWNPRFVDPETGNLRSRESFIALMNSLNLPQPKKIQEAVPANEQCGQVAAAV
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=234, Percent_Identity=49.1452991452991, Blast_Score=219, Evalue=2e-57, Organism=Homo sapiens, GI94538322, Length=231, Percent_Identity=32.9004329004329, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI94538320, Length=231, Percent_Identity=32.9004329004329, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI14150041, Length=210, Percent_Identity=30.4761904761905, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI46361987, Length=200, Percent_Identity=31.5, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI116642887, Length=219, Percent_Identity=28.7671232876712, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI21703352, Length=219, Percent_Identity=28.7671232876712, Blast_Score=73, Evalue=2e-13, Organism=Escherichia coli, GI1787158, Length=216, Percent_Identity=29.6296296296296, Blast_Score=79, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17538952, Length=233, Percent_Identity=43.3476394849785, Blast_Score=200, Evalue=5e-52, Organism=Caenorhabditis elegans, GI17536925, Length=183, Percent_Identity=27.8688524590164, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI221330176, Length=233, Percent_Identity=50.6437768240343, Blast_Score=249, Evalue=1e-66, Organism=Drosophila melanogaster, GI24667703, Length=225, Percent_Identity=32, Blast_Score=97, Evalue=9e-21, Organism=Drosophila melanogaster, GI21356335, Length=225, Percent_Identity=32, Blast_Score=97, Evalue=9e-21, Organism=Drosophila melanogaster, GI24667711, Length=225, Percent_Identity=32, Blast_Score=97, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 26309; Mature: 26309
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFRQLFDAETSTYTYLIADPATREAALVDPVLEQVERDLKLIRELGLTLKYCLETHVHA CCHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH DHITGTGKLRELTGCQGVVPVQAKAQCADRFIGHGETLQVGSVVIEAIATLGHTDSHMTY HCCCCCCCHHHHCCCCCEECCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCEEE RVNGDRVLTGDALLIRGCGRTDFQSGDPGLMYDHVTQHLFTLPDETLVYPGHDYRGHTVS EECCCEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCHH TIGEEKRWNPRFVDPETGNLRSRESFIALMNSLNLPQPKKIQEAVPANEQCGQVAAAV HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHCC >Mature Secondary Structure MLFRQLFDAETSTYTYLIADPATREAALVDPVLEQVERDLKLIRELGLTLKYCLETHVHA CCHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH DHITGTGKLRELTGCQGVVPVQAKAQCADRFIGHGETLQVGSVVIEAIATLGHTDSHMTY HCCCCCCCHHHHCCCCCEECCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCEEE RVNGDRVLTGDALLIRGCGRTDFQSGDPGLMYDHVTQHLFTLPDETLVYPGHDYRGHTVS EECCCEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCHH TIGEEKRWNPRFVDPETGNLRSRESFIALMNSLNLPQPKKIQEAVPANEQCGQVAAAV HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]