| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609363
Identifier: 86609363
GI number: 86609363
Start: 1991354
End: 1991845
Strand: Reverse
Name: 86609363
Synonym: CYB_1907
Alternate gene names: NA
Gene position: 1991845-1991354 (Counterclockwise)
Preceding gene: 86609367
Following gene: 86609362
Centisome position: 65.38
GC content: 58.94
Gene sequence:
>492_bases ATGTCGGATACTGCTCAAACTCACCTTGGCTCCAGCCCAGTGCAAGGACTGCAGTACGTGGTGCTGGGAGTGGCCACTTG CTTCCAGCAGGATCAGGAAGGTCGCCTGGTAGAGGTTTTGGTGGCCGAGCCGGTGCCTGCTGCCGATTTGGACTGCCTGG CCCAAGAACGCCGCAGCACTTCCTATCTTCTCCTCTACGCCACAACCTATGCCGAGATCGTGAACAACGGGATCCCAACT TTGCCTGCCGATGTTTTCCCGCCAGGGGTGTTGTTGGGAGAAGACTTCGTGGAACGGGTGCAGGCAGCGGCCCGCACCTA TCGCAACAAGCCCCAGTTTCGCCATATCCCCCTGCACCAAACCTGCACTCCAGAGCGGGGGGTGTTTAAGCTCAATCACA GCGTTGAGCCCCGACGGATCCTCAACGCGGTTGTGGAGGTGAAGGATGCCGACAACATCAAACAGCACCCCCACACCCAT CAACGGCTCTGA
Upstream 100 bases:
>100_bases GCAAAAATTGTTGCTATGGTGAGAACTGCGCCCGGCTTGAGGGATCTTGGCGCTTGCCGGAGCCGTGAAAGTTCGCTCCC CCGCTTGGAGATCGGCACCG
Downstream 100 bases:
>100_bases CTCACTGGGCTGTACGGGTCAGACGTGCCCTGGAAAGCAGGTTGAACCGCCACTCTGGGCTAGGCTTCGGGATCCCTCTA CCCTTCTGGAGCAGGTACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MSDTAQTHLGSSPVQGLQYVVLGVATCFQQDQEGRLVEVLVAEPVPAADLDCLAQERRSTSYLLLYATTYAEIVNNGIPT LPADVFPPGVLLGEDFVERVQAAARTYRNKPQFRHIPLHQTCTPERGVFKLNHSVEPRRILNAVVEVKDADNIKQHPHTH QRL
Sequences:
>Translated_163_residues MSDTAQTHLGSSPVQGLQYVVLGVATCFQQDQEGRLVEVLVAEPVPAADLDCLAQERRSTSYLLLYATTYAEIVNNGIPT LPADVFPPGVLLGEDFVERVQAAARTYRNKPQFRHIPLHQTCTPERGVFKLNHSVEPRRILNAVVEVKDADNIKQHPHTH QRL >Mature_162_residues SDTAQTHLGSSPVQGLQYVVLGVATCFQQDQEGRLVEVLVAEPVPAADLDCLAQERRSTSYLLLYATTYAEIVNNGIPTL PADVFPPGVLLGEDFVERVQAAARTYRNKPQFRHIPLHQTCTPERGVFKLNHSVEPRRILNAVVEVKDADNIKQHPHTHQ RL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18161; Mature: 18030
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTAQTHLGSSPVQGLQYVVLGVATCFQQDQEGRLVEVLVAEPVPAADLDCLAQERRST CCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHCCC SYLLLYATTYAEIVNNGIPTLPADVFPPGVLLGEDFVERVQAAARTYRNKPQFRHIPLHQ CEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCC TCTPERGVFKLNHSVEPRRILNAVVEVKDADNIKQHPHTHQRL CCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCC >Mature Secondary Structure SDTAQTHLGSSPVQGLQYVVLGVATCFQQDQEGRLVEVLVAEPVPAADLDCLAQERRST CCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHCCC SYLLLYATTYAEIVNNGIPTLPADVFPPGVLLGEDFVERVQAAARTYRNKPQFRHIPLHQ CEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCC TCTPERGVFKLNHSVEPRRILNAVVEVKDADNIKQHPHTHQRL CCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA