| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is thrB [H]
Identifier: 86609358
GI number: 86609358
Start: 1987414
End: 1988340
Strand: Reverse
Name: thrB [H]
Synonym: CYB_1902
Alternate gene names: 86609358
Gene position: 1988340-1987414 (Counterclockwise)
Preceding gene: 86609362
Following gene: 86609354
Centisome position: 65.26
GC content: 60.84
Gene sequence:
>927_bases TTGGTCAAAGAACGCGTAGAGGTGATCGTCCCGGCCACCACCGCCAACTTGGGGCCAGGGTTCGACTGCATCGGTGCAGC CCTAGAGCTCTACAATCACTTCTATTTTCGCGAGATCCCTTCTGGCCTCAGCATCCACTACCGCGGCAGCGACCACATCA GCCAAAGCAAGGACAACCTGGTGTACCGGGCTTTTTGCCGCGCCTTTGAGTTGCTGAGTAAGCCTGTGCCGGGGGTAGAA ATCGAAATTACCCTCAACGTGCCCCTGGCGCGGGGGTTGGGCAGTTCTGCCACCGCCATTGTCGGCGGCTTGCTGGGGGC CAATGCCATTGGAGCACTCAACTTAGCTCCCGAAACCCTTCTACAACTGGCTATTGCCTTGGAGGGCCACCCAGACAATG TGGTGCCCGCCCTGCAGGGCAGTTGTCAGCTTTGTGTGCAGGGACAGCAGGGGCAATGGGTGTTCTGTCCGGTGGAGTGG CATGAGAGCATTGGCATCCTGGCCGTAGTGCCCAACTTTAAGCTTTCCACCCAAGCGGCCCGCGAGATCCTGCCCAAATC CGTCAGCTTGGCGGATGCAGTTTTTTCCAGCAGCCATCTGGGCCTACTCATCCGCAGCCTGCAGTCGGGGCGGGTGGACT GGCTGAAGGTGGCCCTGCAGGATCGGCTGCACCAGCCGGCGCGTATGGAGCTGATCACCGGGTTCAAAACGGTTCAAGCT GCAGCCATGGCTGCCGGAGCCTATGGAGTGGTGATCAGCGGAGCCGGCCCCACTCTTCTGGCCCTCTGTGCTCCCGAGAA TCGGGAACGGGTGGGATCCGCGATGGTCAGCGCTTGGGCGCAGTTGGATATTGAAGCGGAGGCCAAACTGCTCAACCTGG ACCGGCAGGGAGGACGGGTGGTGATCCACTCCCAGCCGTCTGGATAG
Upstream 100 bases:
>100_bases GAATATCCAAGGTCTGGCCATCGTTCGTAGGATAATGGGAGCCCGCAGGCACTAACCCGCAAACATTGAGTTACCCACCG TTCACTGAGGAGTTGTCCCC
Downstream 100 bases:
>100_bases GAAACTTCCTGTCCAATCGGGGAGCTACCCTGCTGCCGGGAAGCCATCTTGCAGCAGCAACACCAAGGGCGGAAGAAATA GCCAAGCCGCCACCATCAAG
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK [H]
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MVKERVEVIVPATTANLGPGFDCIGAALELYNHFYFREIPSGLSIHYRGSDHISQSKDNLVYRAFCRAFELLSKPVPGVE IEITLNVPLARGLGSSATAIVGGLLGANAIGALNLAPETLLQLAIALEGHPDNVVPALQGSCQLCVQGQQGQWVFCPVEW HESIGILAVVPNFKLSTQAAREILPKSVSLADAVFSSSHLGLLIRSLQSGRVDWLKVALQDRLHQPARMELITGFKTVQA AAMAAGAYGVVISGAGPTLLALCAPENRERVGSAMVSAWAQLDIEAEAKLLNLDRQGGRVVIHSQPSG
Sequences:
>Translated_308_residues MVKERVEVIVPATTANLGPGFDCIGAALELYNHFYFREIPSGLSIHYRGSDHISQSKDNLVYRAFCRAFELLSKPVPGVE IEITLNVPLARGLGSSATAIVGGLLGANAIGALNLAPETLLQLAIALEGHPDNVVPALQGSCQLCVQGQQGQWVFCPVEW HESIGILAVVPNFKLSTQAAREILPKSVSLADAVFSSSHLGLLIRSLQSGRVDWLKVALQDRLHQPARMELITGFKTVQA AAMAAGAYGVVISGAGPTLLALCAPENRERVGSAMVSAWAQLDIEAEAKLLNLDRQGGRVVIHSQPSG >Mature_308_residues MVKERVEVIVPATTANLGPGFDCIGAALELYNHFYFREIPSGLSIHYRGSDHISQSKDNLVYRAFCRAFELLSKPVPGVE IEITLNVPLARGLGSSATAIVGGLLGANAIGALNLAPETLLQLAIALEGHPDNVVPALQGSCQLCVQGQQGQWVFCPVEW HESIGILAVVPNFKLSTQAAREILPKSVSLADAVFSSSHLGLLIRSLQSGRVDWLKVALQDRLHQPARMELITGFKTVQA AAMAAGAYGVVISGAGPTLLALCAPENRERVGSAMVSAWAQLDIEAEAKLLNLDRQGGRVVIHSQPSG
Specific function: Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate [H]
COG id: COG0083
COG function: function code E; Homoserine kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GHMP kinase family. Homoserine kinase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786184, Length=313, Percent_Identity=32.5878594249201, Blast_Score=122, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6321814, Length=351, Percent_Identity=28.7749287749288, Blast_Score=133, Evalue=4e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006204 - InterPro: IPR013750 - InterPro: IPR006203 - InterPro: IPR000870 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF08544 GHMP_kinases_C; PF00288 GHMP_kinases_N [H]
EC number: =2.7.1.39 [H]
Molecular weight: Translated: 32755; Mature: 32755
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS00627 GHMP_KINASES_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKERVEVIVPATTANLGPGFDCIGAALELYNHFYFREIPSGLSIHYRGSDHISQSKDNL CCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCH VYRAFCRAFELLSKPVPGVEIEITLNVPLARGLGSSATAIVGGLLGANAIGALNLAPETL HHHHHHHHHHHHHCCCCCEEEEEEECCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHH LQLAIALEGHPDNVVPALQGSCQLCVQGQQGQWVFCPVEWHESIGILAVVPNFKLSTQAA HHHHHHCCCCCCCCCHHCCCCEEEEEECCCCCEEEEEEHHCCCCCEEEEECCCCCCHHHH REILPKSVSLADAVFSSSHLGLLIRSLQSGRVDWLKVALQDRLHQPARMELITGFKTVQA HHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AAMAAGAYGVVISGAGPTLLALCAPENRERVGSAMVSAWAQLDIEAEAKLLNLDRQGGRV HHHHCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEE VIHSQPSG EEECCCCC >Mature Secondary Structure MVKERVEVIVPATTANLGPGFDCIGAALELYNHFYFREIPSGLSIHYRGSDHISQSKDNL CCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCH VYRAFCRAFELLSKPVPGVEIEITLNVPLARGLGSSATAIVGGLLGANAIGALNLAPETL HHHHHHHHHHHHHCCCCCEEEEEEECCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHH LQLAIALEGHPDNVVPALQGSCQLCVQGQQGQWVFCPVEWHESIGILAVVPNFKLSTQAA HHHHHHCCCCCCCCCHHCCCCEEEEEECCCCCEEEEEEHHCCCCCEEEEECCCCCCHHHH REILPKSVSLADAVFSSSHLGLLIRSLQSGRVDWLKVALQDRLHQPARMELITGFKTVQA HHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AAMAAGAYGVVISGAGPTLLALCAPENRERVGSAMVSAWAQLDIEAEAKLLNLDRQGGRV HHHHCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEE VIHSQPSG EEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA