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The map label for this gene is yebA [H]

Identifier: 86609354

GI number: 86609354

Start: 1983819

End: 1984997

Strand: Reverse

Name: yebA [H]

Synonym: CYB_1897

Alternate gene names: 86609354

Gene position: 1984997-1983819 (Counterclockwise)

Preceding gene: 86609358

Following gene: 86609352

Centisome position: 65.15

GC content: 61.83

Gene sequence:

>1179_bases
ATGACGAGTCTCAGTCGTGGGGCACACAGGCTAAAAGGGTGGATAGCGCTCGGATTGCTCACCCTCTTGCTGTTGGGGGG
ACTGGGGGGGGTTGCCCCGTCTCAGGCGCAGAATGTCAACCAATTGCAACAGCGGCAGCAGCAGATCCAGCACCAAATCC
AGAGCACTCAGCGCCGCTTGGGAGAACTGCGCCAAGCAGAAGAAGAAGCCCGCCGCCGCATGGGATCCCTGCGGCAAAAC
CTTCGACAGACCGAATCCAGCCTTCGCGACAATCAGTATCGTCTGGAACAAGCCCAGAAAGCCCTGGAGCAAGCTCAAAA
GGAGCTACAGGAGCTGGAAGACCGCCTGAGACGGCAGCAACAGGGCACGGCGGCCCGTTTGCGCTACATGCAGCGGCAGG
GGGCTGAACATTGGTGGGCTCTGCTGCTCACCAGCCGTGACTTGAACGAGTTTTTCGACCGCCGCCACCAACTGCAACTG
TTGATCGAGGCGGATCGGCAGTTGATCCAAGAGCTGCAAGCAATGGCCAAGGAGGTGGATCAACAGCGCATTGCCCTGGA
GATGCAGCGCAACGAGATCTCTTTGATTTTGCAGGAGCTGGCCGCCCAGAAGAACCAACTGCAGCAGCAGGCGGTCGCCC
AAGAGCAGCTGTTGAGCCGCTTGGCCAACGAACGCGCGGCCTATGAAGCAGCCCAACGGCGGCTGGAAGCCGATTCCCAA
CAGTTGACTCTCCTCATCCAGCAACTGATCGCCCAGCAGGCCCAACAGCAGGGGGGCAGGGATCCCGTTCAAGGGACAGG
CCGATTCATTGCTCCGGTGCGCGGGCCGATCACCAGCGGCTTTGGCTGGCGGGTTCACCCCATCTACCGCAGTCGCCGCT
TTCATGCGGGGATCGATTTTGGTGTGCCCACCGGCACTGCGGTGAGAGCCTCCGACCGGGGCACCGTCATCTACGCCGGC
TGGTACGGCGGCTATGGCTACACGGTGATTGTGAATCACGGGGGCGGCATCACCACCCTGTACGCCCACAACAGCCGCGT
TGCCGTTGGGGTAGGCCAGCAGGTACAGCGGGGGCAAGCAATTGCTGCTTCCGGCTCCACCGGCCTCTCCACCGGGCCCC
ATGTTCACTTTGAAGTGCGCGTCAATGGCCAACCGGTGGATCCCCGCCGCTACCTGTGA

Upstream 100 bases:

>100_bases
TGTTCGGAGTAGCCCTAAATAGCCAGCTCAGGCCCGATTCAGATCCGTGGGGATCTTTGTATCCTTAGGGTCGATGGGTC
AGTCGCAGAGGGTGTGAGGA

Downstream 100 bases:

>100_bases
AGCAAAGCCTCCGTCGGCAACAGCTTCAGGGATCCCGCCTGCAATGTCCACCGCACATCGGCAATGGAGGACAGCTCCTC
CGGGTCGTGGGAAACCACCA

Product: M23B family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MTSLSRGAHRLKGWIALGLLTLLLLGGLGGVAPSQAQNVNQLQQRQQQIQHQIQSTQRRLGELRQAEEEARRRMGSLRQN
LRQTESSLRDNQYRLEQAQKALEQAQKELQELEDRLRRQQQGTAARLRYMQRQGAEHWWALLLTSRDLNEFFDRRHQLQL
LIEADRQLIQELQAMAKEVDQQRIALEMQRNEISLILQELAAQKNQLQQQAVAQEQLLSRLANERAAYEAAQRRLEADSQ
QLTLLIQQLIAQQAQQQGGRDPVQGTGRFIAPVRGPITSGFGWRVHPIYRSRRFHAGIDFGVPTGTAVRASDRGTVIYAG
WYGGYGYTVIVNHGGGITTLYAHNSRVAVGVGQQVQRGQAIAASGSTGLSTGPHVHFEVRVNGQPVDPRRYL

Sequences:

>Translated_392_residues
MTSLSRGAHRLKGWIALGLLTLLLLGGLGGVAPSQAQNVNQLQQRQQQIQHQIQSTQRRLGELRQAEEEARRRMGSLRQN
LRQTESSLRDNQYRLEQAQKALEQAQKELQELEDRLRRQQQGTAARLRYMQRQGAEHWWALLLTSRDLNEFFDRRHQLQL
LIEADRQLIQELQAMAKEVDQQRIALEMQRNEISLILQELAAQKNQLQQQAVAQEQLLSRLANERAAYEAAQRRLEADSQ
QLTLLIQQLIAQQAQQQGGRDPVQGTGRFIAPVRGPITSGFGWRVHPIYRSRRFHAGIDFGVPTGTAVRASDRGTVIYAG
WYGGYGYTVIVNHGGGITTLYAHNSRVAVGVGQQVQRGQAIAASGSTGLSTGPHVHFEVRVNGQPVDPRRYL
>Mature_391_residues
TSLSRGAHRLKGWIALGLLTLLLLGGLGGVAPSQAQNVNQLQQRQQQIQHQIQSTQRRLGELRQAEEEARRRMGSLRQNL
RQTESSLRDNQYRLEQAQKALEQAQKELQELEDRLRRQQQGTAARLRYMQRQGAEHWWALLLTSRDLNEFFDRRHQLQLL
IEADRQLIQELQAMAKEVDQQRIALEMQRNEISLILQELAAQKNQLQQQAVAQEQLLSRLANERAAYEAAQRRLEADSQQ
LTLLIQQLIAQQAQQQGGRDPVQGTGRFIAPVRGPITSGFGWRVHPIYRSRRFHAGIDFGVPTGTAVRASDRGTVIYAGW
YGGYGYTVIVNHGGGITTLYAHNSRVAVGVGQQVQRGQAIAASGSTGLSTGPHVHFEVRVNGQPVDPRRYL

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=126, Percent_Identity=42.0634920634921, Blast_Score=95, Evalue=7e-21,
Organism=Escherichia coli, GI87082297, Length=126, Percent_Identity=40.4761904761905, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1789099, Length=122, Percent_Identity=38.5245901639344, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI87082174, Length=99, Percent_Identity=39.3939393939394, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 44243; Mature: 44112

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEECCCCCCCCCCEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
TSLSRGAHRLKGWIALGLLTLLLLGGLGGVAPSQAQNVNQLQQRQQQIQHQIQSTQRRL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GELRQAEEEARRRMGSLRQNLRQTESSLRDNQYRLEQAQKALEQAQKELQELEDRLRRQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGTAARLRYMQRQGAEHWWALLLTSRDLNEFFDRRHQLQLLIEADRQLIQELQAMAKEVD
CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQRIALEMQRNEISLILQELAAQKNQLQQQAVAQEQLLSRLANERAAYEAAQRRLEADSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
QLTLLIQQLIAQQAQQQGGRDPVQGTGRFIAPVRGPITSGFGWRVHPIYRSRRFHAGIDF
HHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCEEEHHHHCCCCCCCCCC
GVPTGTAVRASDRGTVIYAGWYGGYGYTVIVNHGGGITTLYAHNSRVAVGVGQQVQRGQA
CCCCCCEEEECCCCCEEEEEEECCCEEEEEEECCCCEEEEEECCCEEEECCCHHHHCCCE
IAASGSTGLSTGPHVHFEVRVNGQPVDPRRYL
EEECCCCCCCCCCEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]