| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609346
Identifier: 86609346
GI number: 86609346
Start: 1976926
End: 1977417
Strand: Direct
Name: 86609346
Synonym: CYB_1890
Alternate gene names: NA
Gene position: 1976926-1977417 (Clockwise)
Preceding gene: 86609345
Following gene: 86609347
Centisome position: 64.89
GC content: 58.74
Gene sequence:
>492_bases TTGGAGGTTCTTTGGAGGTCAAGGTGTTCCACACCGCTGTCGCAATCGCCTTCTTCTGAACGCCTCAGCTTTTTTTCGCT TCCTAACCTGTGTGGAGAAAGCCCTATGCCAATGACGCGGCGGTTGCTGTTGCTCAGTGGGCTGGGATCCCTGCTCAATG TGGGGGCCATCTTGGCCGTGGATCGGTGGCGACAAGCCAGCTCCGTTGCGGAGCGGGATCCCGTCGAAGCAACGGCGGCA GCAGAGGTAATCATTCGGGGGTTTCAATACCTGCCCTCGGAGGTTACCCTCAAGCGGGGGGGCAAGGTGACCTTCACCAA CCTGGATTCCACCCCCCACACGGCTACTCCTGTGGAGGGAGCGCAGTTTCAAGGGACGGGACGGCTAAGTCGCAACGAGA GCAAAGCGGTGGTGTTCGAAGTAGCTGGGATCCAGGACTATTTCTGCGATATCCACCCCAGCATGGTGGGCCGCATTGTC GTCGTCGATTAG
Upstream 100 bases:
>100_bases AGCCGCCAACCCCCGGCGACAGCAAGGTGTAGAACCCCCACCGGCGCTGATCTCCAAAGCCTTCCAACGTCCTCTGTAGG ATCTTGGGGTTTGGAGATCT
Downstream 100 bases:
>100_bases GTGGAGGCCATGCAAACCCCTCTTCCCTTCTGGAACATTTGTCGGCGGGTGTACCTGGTTTGGGCCGTCCTTTTGGGGAT TGGGTTTGCTGCCACCCAGT
Product: plastocyanin/azurin family copper binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MEVLWRSRCSTPLSQSPSSERLSFFSLPNLCGESPMPMTRRLLLLSGLGSLLNVGAILAVDRWRQASSVAERDPVEATAA AEVIIRGFQYLPSEVTLKRGGKVTFTNLDSTPHTATPVEGAQFQGTGRLSRNESKAVVFEVAGIQDYFCDIHPSMVGRIV VVD
Sequences:
>Translated_163_residues MEVLWRSRCSTPLSQSPSSERLSFFSLPNLCGESPMPMTRRLLLLSGLGSLLNVGAILAVDRWRQASSVAERDPVEATAA AEVIIRGFQYLPSEVTLKRGGKVTFTNLDSTPHTATPVEGAQFQGTGRLSRNESKAVVFEVAGIQDYFCDIHPSMVGRIV VVD >Mature_163_residues MEVLWRSRCSTPLSQSPSSERLSFFSLPNLCGESPMPMTRRLLLLSGLGSLLNVGAILAVDRWRQASSVAERDPVEATAA AEVIIRGFQYLPSEVTLKRGGKVTFTNLDSTPHTATPVEGAQFQGTGRLSRNESKAVVFEVAGIQDYFCDIHPSMVGRIV VVD
Specific function: Unknown
COG id: COG3794
COG function: function code C; Plastocyanin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17754; Mature: 17754
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVLWRSRCSTPLSQSPSSERLSFFSLPNLCGESPMPMTRRLLLLSGLGSLLNVGAILAV CCCCCCCCCCCCCCCCCCCCCEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DRWRQASSVAERDPVEATAAAEVIIRGFQYLPSEVTLKRGGKVTFTNLDSTPHTATPVEG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCCCCCCCCC AQFQGTGRLSRNESKAVVFEVAGIQDYFCDIHPSMVGRIVVVD CEECCCCCCCCCCCCEEEEEECCCHHHHHHCCHHHHCEEEEEC >Mature Secondary Structure MEVLWRSRCSTPLSQSPSSERLSFFSLPNLCGESPMPMTRRLLLLSGLGSLLNVGAILAV CCCCCCCCCCCCCCCCCCCCCEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DRWRQASSVAERDPVEATAAAEVIIRGFQYLPSEVTLKRGGKVTFTNLDSTPHTATPVEG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCCCCCCCCC AQFQGTGRLSRNESKAVVFEVAGIQDYFCDIHPSMVGRIVVVD CEECCCCCCCCCCCCEEEEEECCCHHHHHHCCHHHHCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA