| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609347
Identifier: 86609347
GI number: 86609347
Start: 1977427
End: 1977939
Strand: Direct
Name: 86609347
Synonym: CYB_1891
Alternate gene names: NA
Gene position: 1977427-1977939 (Clockwise)
Preceding gene: 86609346
Following gene: 86609353
Centisome position: 64.9
GC content: 59.84
Gene sequence:
>513_bases ATGCAAACCCCTCTTCCCTTCTGGAACATTTGTCGGCGGGTGTACCTGGTTTGGGCCGTCCTTTTGGGGATTGGGTTTGC TGCCACCCAGTTTCACCAAGAGGCCAACATCAACTGGCTGTGGCTGGTGATTTCCCTGATTGGGTTGGGCTACATGGTGC GGCAGACTAGCTTGCCGGAGTTTCGAACAGCCGGACTGGCCCACCTCTACTTTGTGGGTTTGGTGTGGACGTTGGTGATC GCCCAGGGCATGATCCTCTCGGTGCTGCCCTTTGTCGGGCGTACCCCTTTGGCAGCTTTGAGCCCATACCTGGGGGTGTT TTGGCTGTGGCAAATGGGGCTGGGCCACTGGCTCAACGGCTTGGTGGATCCGCCGCGCCTCCCCTACTGGATCACCGGTG GGATCCAGATCCTGGCCGGAGTTGCCTGCCTGCTGTGGGGGCTGGAATGGCAGTTTGCGGTGGCAGGGGGAATCGGGGCC TTGGCCATGCTTCTTTTGATCCGGTTGCACTGA
Upstream 100 bases:
>100_bases CAAAGCGGTGGTGTTCGAAGTAGCTGGGATCCAGGACTATTTCTGCGATATCCACCCCAGCATGGTGGGCCGCATTGTCG TCGTCGATTAGGTGGAGGCC
Downstream 100 bases:
>100_bases CCCGTTCACTGATCTGACTTTGGGGTCTTATCCAGGCGCACTCGCCAAACTCCACCTCCCACGGCCACCTCATCTCCTGA GCGCAGCTTGCGTCCCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MQTPLPFWNICRRVYLVWAVLLGIGFAATQFHQEANINWLWLVISLIGLGYMVRQTSLPEFRTAGLAHLYFVGLVWTLVI AQGMILSVLPFVGRTPLAALSPYLGVFWLWQMGLGHWLNGLVDPPRLPYWITGGIQILAGVACLLWGLEWQFAVAGGIGA LAMLLLIRLH
Sequences:
>Translated_170_residues MQTPLPFWNICRRVYLVWAVLLGIGFAATQFHQEANINWLWLVISLIGLGYMVRQTSLPEFRTAGLAHLYFVGLVWTLVI AQGMILSVLPFVGRTPLAALSPYLGVFWLWQMGLGHWLNGLVDPPRLPYWITGGIQILAGVACLLWGLEWQFAVAGGIGA LAMLLLIRLH >Mature_170_residues MQTPLPFWNICRRVYLVWAVLLGIGFAATQFHQEANINWLWLVISLIGLGYMVRQTSLPEFRTAGLAHLYFVGLVWTLVI AQGMILSVLPFVGRTPLAALSPYLGVFWLWQMGLGHWLNGLVDPPRLPYWITGGIQILAGVACLLWGLEWQFAVAGGIGA LAMLLLIRLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18995; Mature: 18995
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTPLPFWNICRRVYLVWAVLLGIGFAATQFHQEANINWLWLVISLIGLGYMVRQTSLPE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCH FRTAGLAHLYFVGLVWTLVIAQGMILSVLPFVGRTPLAALSPYLGVFWLWQMGLGHWLNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC LVDPPRLPYWITGGIQILAGVACLLWGLEWQFAVAGGIGALAMLLLIRLH CCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure MQTPLPFWNICRRVYLVWAVLLGIGFAATQFHQEANINWLWLVISLIGLGYMVRQTSLPE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCH FRTAGLAHLYFVGLVWTLVIAQGMILSVLPFVGRTPLAALSPYLGVFWLWQMGLGHWLNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC LVDPPRLPYWITGGIQILAGVACLLWGLEWQFAVAGGIGALAMLLLIRLH CCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA