Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609347

Identifier: 86609347

GI number: 86609347

Start: 1977427

End: 1977939

Strand: Direct

Name: 86609347

Synonym: CYB_1891

Alternate gene names: NA

Gene position: 1977427-1977939 (Clockwise)

Preceding gene: 86609346

Following gene: 86609353

Centisome position: 64.9

GC content: 59.84

Gene sequence:

>513_bases
ATGCAAACCCCTCTTCCCTTCTGGAACATTTGTCGGCGGGTGTACCTGGTTTGGGCCGTCCTTTTGGGGATTGGGTTTGC
TGCCACCCAGTTTCACCAAGAGGCCAACATCAACTGGCTGTGGCTGGTGATTTCCCTGATTGGGTTGGGCTACATGGTGC
GGCAGACTAGCTTGCCGGAGTTTCGAACAGCCGGACTGGCCCACCTCTACTTTGTGGGTTTGGTGTGGACGTTGGTGATC
GCCCAGGGCATGATCCTCTCGGTGCTGCCCTTTGTCGGGCGTACCCCTTTGGCAGCTTTGAGCCCATACCTGGGGGTGTT
TTGGCTGTGGCAAATGGGGCTGGGCCACTGGCTCAACGGCTTGGTGGATCCGCCGCGCCTCCCCTACTGGATCACCGGTG
GGATCCAGATCCTGGCCGGAGTTGCCTGCCTGCTGTGGGGGCTGGAATGGCAGTTTGCGGTGGCAGGGGGAATCGGGGCC
TTGGCCATGCTTCTTTTGATCCGGTTGCACTGA

Upstream 100 bases:

>100_bases
CAAAGCGGTGGTGTTCGAAGTAGCTGGGATCCAGGACTATTTCTGCGATATCCACCCCAGCATGGTGGGCCGCATTGTCG
TCGTCGATTAGGTGGAGGCC

Downstream 100 bases:

>100_bases
CCCGTTCACTGATCTGACTTTGGGGTCTTATCCAGGCGCACTCGCCAAACTCCACCTCCCACGGCCACCTCATCTCCTGA
GCGCAGCTTGCGTCCCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MQTPLPFWNICRRVYLVWAVLLGIGFAATQFHQEANINWLWLVISLIGLGYMVRQTSLPEFRTAGLAHLYFVGLVWTLVI
AQGMILSVLPFVGRTPLAALSPYLGVFWLWQMGLGHWLNGLVDPPRLPYWITGGIQILAGVACLLWGLEWQFAVAGGIGA
LAMLLLIRLH

Sequences:

>Translated_170_residues
MQTPLPFWNICRRVYLVWAVLLGIGFAATQFHQEANINWLWLVISLIGLGYMVRQTSLPEFRTAGLAHLYFVGLVWTLVI
AQGMILSVLPFVGRTPLAALSPYLGVFWLWQMGLGHWLNGLVDPPRLPYWITGGIQILAGVACLLWGLEWQFAVAGGIGA
LAMLLLIRLH
>Mature_170_residues
MQTPLPFWNICRRVYLVWAVLLGIGFAATQFHQEANINWLWLVISLIGLGYMVRQTSLPEFRTAGLAHLYFVGLVWTLVI
AQGMILSVLPFVGRTPLAALSPYLGVFWLWQMGLGHWLNGLVDPPRLPYWITGGIQILAGVACLLWGLEWQFAVAGGIGA
LAMLLLIRLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18995; Mature: 18995

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTPLPFWNICRRVYLVWAVLLGIGFAATQFHQEANINWLWLVISLIGLGYMVRQTSLPE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCH
FRTAGLAHLYFVGLVWTLVIAQGMILSVLPFVGRTPLAALSPYLGVFWLWQMGLGHWLNG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
LVDPPRLPYWITGGIQILAGVACLLWGLEWQFAVAGGIGALAMLLLIRLH
CCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MQTPLPFWNICRRVYLVWAVLLGIGFAATQFHQEANINWLWLVISLIGLGYMVRQTSLPE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCH
FRTAGLAHLYFVGLVWTLVIAQGMILSVLPFVGRTPLAALSPYLGVFWLWQMGLGHWLNG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
LVDPPRLPYWITGGIQILAGVACLLWGLEWQFAVAGGIGALAMLLLIRLH
CCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA