| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609345
Identifier: 86609345
GI number: 86609345
Start: 1976131
End: 1976796
Strand: Direct
Name: 86609345
Synonym: CYB_1889
Alternate gene names: NA
Gene position: 1976131-1976796 (Clockwise)
Preceding gene: 86609342
Following gene: 86609346
Centisome position: 64.86
GC content: 60.06
Gene sequence:
>666_bases ATGAAGACTGCAAAGACTCCCTTCGCTCTGCCTCAATTGGCCGCCGAATGGGATCCCAGCCCTGCAACTTCCCGCCGCAG CTTGTTGTTGGCTGGTTTGCTGGCGGGCGTAGGTGGAGCAATTGGATTGCGCACCCTGCCCGGTGCCGCCCAGTCCAACA CTGCCGACATCGCCATCCTCAACGCGGCCATTGACTTGGAACAGCAGGCGATCTGGGCCTACAAAACCGCTGCCGGCAAG TTGAGCAATACTGAGGTGGGCAAGATCGTGTTGGAAGTGGCCACCAAGAACCTGAAGGATCACGAACAGCACCGGGATCT GCTGGCGGGCGCCGTGCGCCAACTGGGAGGGATACCCTCTCGGGCCCGGGATAGCTACGACCTTTCCACCTACATCGACA ACAAAGAAGGCAATCTCGACTCCGATGCCAACATCGCCAAGCTGGCCCTGGCTCTGGAGTTCGATGCGGCCCTAGCCTAC AACGATGCCTTTGTCCAGCTTTCCAACAAAGACCTGGTGGCTGCCGCCAGCACCATTGGCCCCAACGAAGTTGCCCATGC CACTGCAATCCGGGCCGTGTTCCACAGCCTTGATCCCAGCATTCTGGTGGTGCCTGCCCCCTTTGTCAGCGCCGAGACTC GGGAGCGCTGGATCCTGAAGGTGTAA
Upstream 100 bases:
>100_bases ATCCACGGCGTATCTCCATCAGACCAGGCCAGAGGGAATTGCCCGACCCAGAGCAAGCCCCTGAAGGTTGGTTGCCATCT TTCGAGACAGGAGACTTGAG
Downstream 100 bases:
>100_bases AGCCCCTGCCGGCGATGACTTCCAGCTAAAGCCGCCAACCCCCGGCGACAGCAAGGTGTAGAACCCCCACCGGCGCTGAT CTCCAAAGCCTTCCAACGTC
Product: Tat pathway signal sequence domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MKTAKTPFALPQLAAEWDPSPATSRRSLLLAGLLAGVGGAIGLRTLPGAAQSNTADIAILNAAIDLEQQAIWAYKTAAGK LSNTEVGKIVLEVATKNLKDHEQHRDLLAGAVRQLGGIPSRARDSYDLSTYIDNKEGNLDSDANIAKLALALEFDAALAY NDAFVQLSNKDLVAAASTIGPNEVAHATAIRAVFHSLDPSILVVPAPFVSAETRERWILKV
Sequences:
>Translated_221_residues MKTAKTPFALPQLAAEWDPSPATSRRSLLLAGLLAGVGGAIGLRTLPGAAQSNTADIAILNAAIDLEQQAIWAYKTAAGK LSNTEVGKIVLEVATKNLKDHEQHRDLLAGAVRQLGGIPSRARDSYDLSTYIDNKEGNLDSDANIAKLALALEFDAALAY NDAFVQLSNKDLVAAASTIGPNEVAHATAIRAVFHSLDPSILVVPAPFVSAETRERWILKV >Mature_221_residues MKTAKTPFALPQLAAEWDPSPATSRRSLLLAGLLAGVGGAIGLRTLPGAAQSNTADIAILNAAIDLEQQAIWAYKTAAGK LSNTEVGKIVLEVATKNLKDHEQHRDLLAGAVRQLGGIPSRARDSYDLSTYIDNKEGNLDSDANIAKLALALEFDAALAY NDAFVQLSNKDLVAAASTIGPNEVAHATAIRAVFHSLDPSILVVPAPFVSAETRERWILKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23403; Mature: 23403
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTAKTPFALPQLAAEWDPSPATSRRSLLLAGLLAGVGGAIGLRTLPGAAQSNTADIAIL CCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE NAAIDLEQQAIWAYKTAAGKLSNTEVGKIVLEVATKNLKDHEQHRDLLAGAVRQLGGIPS EEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC RARDSYDLSTYIDNKEGNLDSDANIAKLALALEFDAALAYNDAFVQLSNKDLVAAASTIG CCCCCCCHHEEECCCCCCCCCCCCHHHEEEEEECCHHEEECCEEEEECCCCEEEEECCCC PNEVAHATAIRAVFHSLDPSILVVPAPFVSAETRERWILKV CHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEC >Mature Secondary Structure MKTAKTPFALPQLAAEWDPSPATSRRSLLLAGLLAGVGGAIGLRTLPGAAQSNTADIAIL CCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE NAAIDLEQQAIWAYKTAAGKLSNTEVGKIVLEVATKNLKDHEQHRDLLAGAVRQLGGIPS EEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC RARDSYDLSTYIDNKEGNLDSDANIAKLALALEFDAALAYNDAFVQLSNKDLVAAASTIG CCCCCCCHHEEECCCCCCCCCCCCHHHEEEEEECCHHEEECCEEEEECCCCEEEEECCCC PNEVAHATAIRAVFHSLDPSILVVPAPFVSAETRERWILKV CHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA