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The map label for this gene is xp55 [H]

Identifier: 86609341

GI number: 86609341

Start: 1969281

End: 1970906

Strand: Reverse

Name: xp55 [H]

Synonym: CYB_1885

Alternate gene names: 86609341

Gene position: 1970906-1969281 (Counterclockwise)

Preceding gene: 86609343

Following gene: 86609340

Centisome position: 64.69

GC content: 56.03

Gene sequence:

>1626_bases
ATGGCATCAAGCTTAAAAGTAACTGTGTGGTCTGTGGGCCTCTTCTTGCTGAGCCAGATGTGGGCTGGATGCGCTCAGAA
TGCTGCTGAGCGGACAGCTTTCGATCCAAAGCTAGCAGGATCCAGCGATCAAATCGTGCTGGCCATTGGAGGGGAAAGGG
AAGAAGGATTTGATCCCACCCTGGGCTGGGGACGTTACGGTTCGCCTTTGTTCCAAAGCACTCTGCTGCGGCGGGACGAG
AACCTTGAGATTGTAAACGACCTGGCGACTGGCTACACTGTCAGCCAAGATGGCCTAACCTGGACGGTAACCCTACGAAA
GGATGCAGTCTTCTCCGATGGAAAACCTGTCACAGCAGCGGACGTGGCTTACACCTTTAACCAAGCAGCTCGGAGTGGTG
GTCTGGTCGACCTAACCGCCCTAAAGGAAGCAGTAGCTATCGACACTCATACGGTGGAGCTGCGGCTGCAAAAACCCCAA
AGTACTTTTGTCAACCGCCTCATCACCTTGGGTATCGTGCCTCAACATGCCCACGGGCCTGATTATGCTCGCAAACCCAT
TGGCTCTGGCCCCTACCGACTGGTGCAGTGGGATGAGGGGCAACAACTGATTGTGGAGGCAAATCCCTTATATTACGGCC
AGACTCCTGGCATTCGGCGGCTGGTTTTCCTTTTCCTGGAGGAGGATGCAGCCTTTGCAGCAGCCCGAGCCGGACAGGTA
CACGTGGTTAGCGTGCCTCAGTCTTTGGCTAAGCAAACTGTTGAGGGCATGAAGCTTCACGCCATTCCCAGTGTGGATAA
CCGAGGGCTGATGTTCCCCTTTCCCCCTAAAACCGGTGCGACAACCCCAAAGGGATACCCCATCGGCAACGATGTGACTT
CTGACTTGGCGATTCGCAAGGCGGTCAACTTCGCCATTGACCGACAGGCGCTGGTGGATGGAGTCCTAGAAGGCTACGGA
TCCCCTGCCTATGGCCCAGTCAGCGGTTTGCCCTGGGAAGAGCCGACCGCCAAGATTGAGGACAACAATCCAGACCTGGC
CCGTCAGATTCTAGCTGAGGGAGGCTGGAGCGATAAAGATGGGGATGGGGTAGTGGAAAAAAACGGGCTGCGGGCTGAGT
TCACCGTGCTCTACCCGGCCAACGACAGCATTCGCCAAGCCCTGGCCCTAGCTGTTGCAGAAATGCTGCGGCCTGTGGGC
ATCCGAGTCAATGTCGAGGGCAAAAGTTGGGATGACATCACTCCGCTCATGCACAGCAACGTGGTGCTGTTTGGCTGGGG
CAGCCATGACCCAACTGAGGTGTACAACCTCTACCACAGCAAAGCGGCCCAGGGGGGATTTTTCAATGCCGGCTACTATG
CCAACCCGTTTGTGGATCGAATGCTGGATCTGGCTATGGAGGCCCCCTCTGAAGCTGAAGCTATCCCCTTCTGGCGGGCA
GCCCAGTGGGATGGAAAGCAAGGCTTTACTGCCAAAGGAGATGCAGCCTGGGCTTGGTTGGTGAACCTGGATCATACCTA
CTTTGTCCAAGAGTGCTTGGATATAGGCCAGCCGCAGGTACAGCCTCATGGCCATGGTTGGCCAATCACAGCCAACATCA
CCCGTTGGAAATGGACGTGCAACTGA

Upstream 100 bases:

>100_bases
TCTCAAGATAAGGCAGTGATAGCTTAGCTGCCATAAGTCTTGTCCAGGAGGCAAGGGGGTTTGCTCCTTTTTGCTGAAAA
AGCGACAGATCGGGGTTTCT

Downstream 100 bases:

>100_bases
GGTCAGTTCTGCTGTTTCTGGCTTATAAGCTGACTCGGCTGGGGTTGCTGCTGGCGGCTGTGGCAGTCCTGACGTTTGCC
CTGCTCAGCTTCTCCCCTGT

Product: peptide/nickel/opine uptake ABC transporter periplasmic substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 540

Protein sequence:

>541_residues
MASSLKVTVWSVGLFLLSQMWAGCAQNAAERTAFDPKLAGSSDQIVLAIGGEREEGFDPTLGWGRYGSPLFQSTLLRRDE
NLEIVNDLATGYTVSQDGLTWTVTLRKDAVFSDGKPVTAADVAYTFNQAARSGGLVDLTALKEAVAIDTHTVELRLQKPQ
STFVNRLITLGIVPQHAHGPDYARKPIGSGPYRLVQWDEGQQLIVEANPLYYGQTPGIRRLVFLFLEEDAAFAAARAGQV
HVVSVPQSLAKQTVEGMKLHAIPSVDNRGLMFPFPPKTGATTPKGYPIGNDVTSDLAIRKAVNFAIDRQALVDGVLEGYG
SPAYGPVSGLPWEEPTAKIEDNNPDLARQILAEGGWSDKDGDGVVEKNGLRAEFTVLYPANDSIRQALALAVAEMLRPVG
IRVNVEGKSWDDITPLMHSNVVLFGWGSHDPTEVYNLYHSKAAQGGFFNAGYYANPFVDRMLDLAMEAPSEAEAIPFWRA
AQWDGKQGFTAKGDAAWAWLVNLDHTYFVQECLDIGQPQVQPHGHGWPITANITRWKWTCN

Sequences:

>Translated_541_residues
MASSLKVTVWSVGLFLLSQMWAGCAQNAAERTAFDPKLAGSSDQIVLAIGGEREEGFDPTLGWGRYGSPLFQSTLLRRDE
NLEIVNDLATGYTVSQDGLTWTVTLRKDAVFSDGKPVTAADVAYTFNQAARSGGLVDLTALKEAVAIDTHTVELRLQKPQ
STFVNRLITLGIVPQHAHGPDYARKPIGSGPYRLVQWDEGQQLIVEANPLYYGQTPGIRRLVFLFLEEDAAFAAARAGQV
HVVSVPQSLAKQTVEGMKLHAIPSVDNRGLMFPFPPKTGATTPKGYPIGNDVTSDLAIRKAVNFAIDRQALVDGVLEGYG
SPAYGPVSGLPWEEPTAKIEDNNPDLARQILAEGGWSDKDGDGVVEKNGLRAEFTVLYPANDSIRQALALAVAEMLRPVG
IRVNVEGKSWDDITPLMHSNVVLFGWGSHDPTEVYNLYHSKAAQGGFFNAGYYANPFVDRMLDLAMEAPSEAEAIPFWRA
AQWDGKQGFTAKGDAAWAWLVNLDHTYFVQECLDIGQPQVQPHGHGWPITANITRWKWTCN
>Mature_540_residues
ASSLKVTVWSVGLFLLSQMWAGCAQNAAERTAFDPKLAGSSDQIVLAIGGEREEGFDPTLGWGRYGSPLFQSTLLRRDEN
LEIVNDLATGYTVSQDGLTWTVTLRKDAVFSDGKPVTAADVAYTFNQAARSGGLVDLTALKEAVAIDTHTVELRLQKPQS
TFVNRLITLGIVPQHAHGPDYARKPIGSGPYRLVQWDEGQQLIVEANPLYYGQTPGIRRLVFLFLEEDAAFAAARAGQVH
VVSVPQSLAKQTVEGMKLHAIPSVDNRGLMFPFPPKTGATTPKGYPIGNDVTSDLAIRKAVNFAIDRQALVDGVLEGYGS
PAYGPVSGLPWEEPTAKIEDNNPDLARQILAEGGWSDKDGDGVVEKNGLRAEFTVLYPANDSIRQALALAVAEMLRPVGI
RVNVEGKSWDDITPLMHSNVVLFGWGSHDPTEVYNLYHSKAAQGGFFNAGYYANPFVDRMLDLAMEAPSEAEAIPFWRAA
QWDGKQGFTAKGDAAWAWLVNLDHTYFVQECLDIGQPQVQPHGHGWPITANITRWKWTCN

Specific function: Required for transport of an unidentified substrate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=486, Percent_Identity=26.1316872427983, Blast_Score=108, Evalue=7e-25,
Organism=Escherichia coli, GI1787762, Length=424, Percent_Identity=26.1792452830189, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI87081878, Length=437, Percent_Identity=24.4851258581236, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1787495, Length=432, Percent_Identity=22.2222222222222, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1789966, Length=479, Percent_Identity=21.0855949895616, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 59108; Mature: 58977

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSLKVTVWSVGLFLLSQMWAGCAQNAAERTAFDPKLAGSSDQIVLAIGGEREEGFDPT
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCC
LGWGRYGSPLFQSTLLRRDENLEIVNDLATGYTVSQDGLTWTVTLRKDAVFSDGKPVTAA
CCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCEEEECCCEEEEEEEECCCEECCCCCCCHH
DVAYTFNQAARSGGLVDLTALKEAVAIDTHTVELRLQKPQSTFVNRLITLGIVPQHAHGP
HHHHHHHHHHHCCCCEEHHHHHHHHEECEEEEEEEEECCHHHHHHHHHHHEECCCCCCCC
DYARKPIGSGPYRLVQWDEGQQLIVEANPLYYGQTPGIRRLVFLFLEEDAAFAAARAGQV
CHHHCCCCCCCEEEEEECCCCEEEEECCCEEECCCCCHHEEEEEEEECCCHHHHHCCCCE
HVVSVPQSLAKQTVEGMKLHAIPSVDNRGLMFPFPPKTGATTPKGYPIGNDVTSDLAIRK
EEEECCHHHHHHHHCCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHH
AVNFAIDRQALVDGVLEGYGSPAYGPVSGLPWEEPTAKIEDNNPDLARQILAEGGWSDKD
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCCC
GDGVVEKNGLRAEFTVLYPANDSIRQALALAVAEMLRPVGIRVNVEGKSWDDITPLMHSN
CCCCEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCC
VVLFGWGSHDPTEVYNLYHSKAAQGGFFNAGYYANPFVDRMLDLAMEAPSEAEAIPFWRA
EEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEE
AQWDGKQGFTAKGDAAWAWLVNLDHTYFVQECLDIGQPQVQPHGHGWPITANITRWKWTC
CCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCEEECEEEEEEEE
N
C
>Mature Secondary Structure 
ASSLKVTVWSVGLFLLSQMWAGCAQNAAERTAFDPKLAGSSDQIVLAIGGEREEGFDPT
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCC
LGWGRYGSPLFQSTLLRRDENLEIVNDLATGYTVSQDGLTWTVTLRKDAVFSDGKPVTAA
CCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCEEEECCCEEEEEEEECCCEECCCCCCCHH
DVAYTFNQAARSGGLVDLTALKEAVAIDTHTVELRLQKPQSTFVNRLITLGIVPQHAHGP
HHHHHHHHHHHCCCCEEHHHHHHHHEECEEEEEEEEECCHHHHHHHHHHHEECCCCCCCC
DYARKPIGSGPYRLVQWDEGQQLIVEANPLYYGQTPGIRRLVFLFLEEDAAFAAARAGQV
CHHHCCCCCCCEEEEEECCCCEEEEECCCEEECCCCCHHEEEEEEEECCCHHHHHCCCCE
HVVSVPQSLAKQTVEGMKLHAIPSVDNRGLMFPFPPKTGATTPKGYPIGNDVTSDLAIRK
EEEECCHHHHHHHHCCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHH
AVNFAIDRQALVDGVLEGYGSPAYGPVSGLPWEEPTAKIEDNNPDLARQILAEGGWSDKD
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCCC
GDGVVEKNGLRAEFTVLYPANDSIRQALALAVAEMLRPVGIRVNVEGKSWDDITPLMHSN
CCCCEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCC
VVLFGWGSHDPTEVYNLYHSKAAQGGFFNAGYYANPFVDRMLDLAMEAPSEAEAIPFWRA
EEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEE
AQWDGKQGFTAKGDAAWAWLVNLDHTYFVQECLDIGQPQVQPHGHGWPITANITRWKWTC
CCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCEEECEEEEEEEE
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3453116 [H]