Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609304

Identifier: 86609304

GI number: 86609304

Start: 1933938

End: 1935041

Strand: Direct

Name: 86609304

Synonym: CYB_1848

Alternate gene names: NA

Gene position: 1933938-1935041 (Clockwise)

Preceding gene: 86609303

Following gene: 86609307

Centisome position: 63.48

GC content: 59.87

Gene sequence:

>1104_bases
TTGCCCAGTGAGCAGTTTGAAAGCTCTCCTGTCCCGTTTTCAGGTGCAAATCCCAGGATAAGGAAGGGCATTGTGTTGAA
TCTTTTTGCCGGCCTGCTGTTTGCATCCGCTTTCATCAGCCCCTCGGGAAACGTTGTTATCGAAGGGGATTCGGGGGAAT
GGGTTTTCGCCGATCATCAAGTCCTAGAAGGGGTTACTCTAACCCTTCTCACACGGCCCGGAGAGAGCTTGGCCTCTTGG
AGAGAAATGCTCTCCGTCATGGACGTTCATGTCCAGGGATCGCCGCGCTTTCTCGCCAACCACATGCGGGACAACATCCT
GGCTAGCTGCCCCCAAACGACTTGGGAGTTTCATCGGGAGAGCGAAGAAGATGTGCTCTACGAGTTCCGCAGTGCTGGTT
GCCGTGGGACGGTGAGTGGAGTTGAGGAACATGAGATTGGCCGGATCACCCGAGGCCCGCGCGGCAGTGTGCGCATTGCC
TACGCCGCCAAGCCCCAGATGATGCCTGAACTGCGCAGCCGCTGGCTGAACTTACTGGGCAGCGAGGTGGGGACAGCTCA
GGGTTTTCCCATTCGCAACCTCAGCGGGGCGGCTGCACAGCCTTCTTCCCCGGCTTCAGAAGTCCCAACCTCAGAGCGGC
AGATCGCCCAGTGGCTGCAGGAAGCAACCGATGCCCTGAAGCAGCAGGAAGATTTGCTGGCCGAGCTGGATCGCCTAGGT
CAGGAAGCGCAGGCGGATGCCCGTGCCTACAGCCAAGGAACCCCCAAAGAGGCGGGGCTAAGGACAATCGGCCTGTACCG
AGGTCGGGGGGACGGCAGCCCTGGCGAGGCCACAACCGAGTTCAAGACCACTGACACCTTGATCTGGGCCATCTTGCCGG
TGGGCAACCTTCCTGCCAACGCCAAGGTGGAGATACTCTGGTACTACGAGGGCGGAGAAGCCGGGGGCGAGCAACTGATC
CGCAGGCTAGATGTTCCCTGGGATCCCTTGGCCGATACCGTGCGAGGCTTTCTGAGCTTCAGCCAACCCTACACCGGCCG
CTACCGCGTCGAGATTCATGTCAACGGCGAGAAGGTGGGAGTTGGCCGCTTCACGATCCGGTAG

Upstream 100 bases:

>100_bases
CATTTGGGTAAGGTTAGCAAAATCAAGCTATAGGAATCTATCAAGATTCTTCTGAGGTGAGCCTTGTAAACGGCAACGAC
CTTGTTCAGCCCTTCTTTGC

Downstream 100 bases:

>100_bases
TCTCCTGCAAGAAGTACCCCTCCTACGGGGTTACACAGGCTTGGGGGTGGACAATCTCCATCACCAACTCCGACGGGGTG
AAGACCGCTGTGCTGGGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MPSEQFESSPVPFSGANPRIRKGIVLNLFAGLLFASAFISPSGNVVIEGDSGEWVFADHQVLEGVTLTLLTRPGESLASW
REMLSVMDVHVQGSPRFLANHMRDNILASCPQTTWEFHRESEEDVLYEFRSAGCRGTVSGVEEHEIGRITRGPRGSVRIA
YAAKPQMMPELRSRWLNLLGSEVGTAQGFPIRNLSGAAAQPSSPASEVPTSERQIAQWLQEATDALKQQEDLLAELDRLG
QEAQADARAYSQGTPKEAGLRTIGLYRGRGDGSPGEATTEFKTTDTLIWAILPVGNLPANAKVEILWYYEGGEAGGEQLI
RRLDVPWDPLADTVRGFLSFSQPYTGRYRVEIHVNGEKVGVGRFTIR

Sequences:

>Translated_367_residues
MPSEQFESSPVPFSGANPRIRKGIVLNLFAGLLFASAFISPSGNVVIEGDSGEWVFADHQVLEGVTLTLLTRPGESLASW
REMLSVMDVHVQGSPRFLANHMRDNILASCPQTTWEFHRESEEDVLYEFRSAGCRGTVSGVEEHEIGRITRGPRGSVRIA
YAAKPQMMPELRSRWLNLLGSEVGTAQGFPIRNLSGAAAQPSSPASEVPTSERQIAQWLQEATDALKQQEDLLAELDRLG
QEAQADARAYSQGTPKEAGLRTIGLYRGRGDGSPGEATTEFKTTDTLIWAILPVGNLPANAKVEILWYYEGGEAGGEQLI
RRLDVPWDPLADTVRGFLSFSQPYTGRYRVEIHVNGEKVGVGRFTIR
>Mature_366_residues
PSEQFESSPVPFSGANPRIRKGIVLNLFAGLLFASAFISPSGNVVIEGDSGEWVFADHQVLEGVTLTLLTRPGESLASWR
EMLSVMDVHVQGSPRFLANHMRDNILASCPQTTWEFHRESEEDVLYEFRSAGCRGTVSGVEEHEIGRITRGPRGSVRIAY
AAKPQMMPELRSRWLNLLGSEVGTAQGFPIRNLSGAAAQPSSPASEVPTSERQIAQWLQEATDALKQQEDLLAELDRLGQ
EAQADARAYSQGTPKEAGLRTIGLYRGRGDGSPGEATTEFKTTDTLIWAILPVGNLPANAKVEILWYYEGGEAGGEQLIR
RLDVPWDPLADTVRGFLSFSQPYTGRYRVEIHVNGEKVGVGRFTIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40312; Mature: 40181

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSEQFESSPVPFSGANPRIRKGIVLNLFAGLLFASAFISPSGNVVIEGDSGEWVFADHQ
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECHH
VLEGVTLTLLTRPGESLASWREMLSVMDVHVQGSPRFLANHMRDNILASCPQTTWEFHRE
HHCCEEEEEEECCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCCHHHHHHCC
SEEDVLYEFRSAGCRGTVSGVEEHEIGRITRGPRGSVRIAYAAKPQMMPELRSRWLNLLG
CHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
SEVGTAQGFPIRNLSGAAAQPSSPASEVPTSERQIAQWLQEATDALKQQEDLLAELDRLG
HHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QEAQADARAYSQGTPKEAGLRTIGLYRGRGDGSPGEATTEFKTTDTLIWAILPVGNLPAN
HHHHHHHHHHCCCCCHHHCCEEEEEEECCCCCCCCCCCCCCCCHHEEEEEEEECCCCCCC
AKVEILWYYEGGEAGGEQLIRRLDVPWDPLADTVRGFLSFSQPYTGRYRVEIHVNGEKVG
CEEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEE
VGRFTIR
CCEEEEC
>Mature Secondary Structure 
PSEQFESSPVPFSGANPRIRKGIVLNLFAGLLFASAFISPSGNVVIEGDSGEWVFADHQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECHH
VLEGVTLTLLTRPGESLASWREMLSVMDVHVQGSPRFLANHMRDNILASCPQTTWEFHRE
HHCCEEEEEEECCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCCHHHHHHCC
SEEDVLYEFRSAGCRGTVSGVEEHEIGRITRGPRGSVRIAYAAKPQMMPELRSRWLNLLG
CHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
SEVGTAQGFPIRNLSGAAAQPSSPASEVPTSERQIAQWLQEATDALKQQEDLLAELDRLG
HHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QEAQADARAYSQGTPKEAGLRTIGLYRGRGDGSPGEATTEFKTTDTLIWAILPVGNLPAN
HHHHHHHHHHCCCCCHHHCCEEEEEEECCCCCCCCCCCCCCCCHHEEEEEEEECCCCCCC
AKVEILWYYEGGEAGGEQLIRRLDVPWDPLADTVRGFLSFSQPYTGRYRVEIHVNGEKVG
CEEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEE
VGRFTIR
CCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA