| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609296
Identifier: 86609296
GI number: 86609296
Start: 1927300
End: 1927701
Strand: Reverse
Name: 86609296
Synonym: CYB_1840
Alternate gene names: NA
Gene position: 1927701-1927300 (Counterclockwise)
Preceding gene: 86609298
Following gene: 86609289
Centisome position: 63.27
GC content: 58.46
Gene sequence:
>402_bases ATGCTGTATCTGGCACGGGTACACAAAAAAAGTCTCTTCGGCCAGGGGGAGCTGCAGCTCTTGGCCCGGCAGGCCGAGGA CGGTGTTTGGATGCCGCTGCGCAAGCCAGAAGGGGTCACCTGCAAAGAGGTTGGCCCTTACAACATTGGGGTGTTGCTGC TGGTTGAGCTTTCGGAAGAGCGGCAGGTACGGCGGGCGGAAGAGGCAGCCATGAAGCTGGTGGAGATGTTGCACAACCTA TCCCGAACCCACAGTCTGGTGGATCTGTCGGAGATTGAAAGCTGGCGGCAATCCTTGACTCGGCAAAGCCAAGAGCTGAG CCGTCGCGAAGCAGAGGTGGCCGCTCGCCAAGAGCAACTGCAACAGTGGGAAAACCGTCTGCGAGAAAAGCTGTCTCCTT GA
Upstream 100 bases:
>100_bases GTGGCACGGACAACAAAACCCAGGTTTGGGTGTAGGGACGGGATCCCTCTTCAATAAAAGGGATCGGTGCTAAAATCGGC AGCATCTTCCTGCATGTTCC
Downstream 100 bases:
>100_bases GCTCTCAGATCTACTCTTATCTTAAGTAGAGTCATTTTAAGCTAATTGAGAAGCCCCCCAAGTGCTCTGTGCCGCTGCCA TCACCCCATCTCCTAAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MLYLARVHKKSLFGQGELQLLARQAEDGVWMPLRKPEGVTCKEVGPYNIGVLLLVELSEERQVRRAEEAAMKLVEMLHNL SRTHSLVDLSEIESWRQSLTRQSQELSRREAEVAARQEQLQQWENRLREKLSP
Sequences:
>Translated_133_residues MLYLARVHKKSLFGQGELQLLARQAEDGVWMPLRKPEGVTCKEVGPYNIGVLLLVELSEERQVRRAEEAAMKLVEMLHNL SRTHSLVDLSEIESWRQSLTRQSQELSRREAEVAARQEQLQQWENRLREKLSP >Mature_133_residues MLYLARVHKKSLFGQGELQLLARQAEDGVWMPLRKPEGVTCKEVGPYNIGVLLLVELSEERQVRRAEEAAMKLVEMLHNL SRTHSLVDLSEIESWRQSLTRQSQELSRREAEVAARQEQLQQWENRLREKLSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15490; Mature: 15490
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYLARVHKKSLFGQGELQLLARQAEDGVWMPLRKPEGVTCKEVGPYNIGVLLLVELSEE CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHH RQVRRAEEAAMKLVEMLHNLSRTHSLVDLSEIESWRQSLTRQSQELSRREAEVAARQEQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQWENRLREKLSP HHHHHHHHHHCCC >Mature Secondary Structure MLYLARVHKKSLFGQGELQLLARQAEDGVWMPLRKPEGVTCKEVGPYNIGVLLLVELSEE CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHH RQVRRAEEAAMKLVEMLHNLSRTHSLVDLSEIESWRQSLTRQSQELSRREAEVAARQEQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQWENRLREKLSP HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA