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The map label for this gene is gvpA

Identifier: 86609289

GI number: 86609289

Start: 1922888

End: 1923106

Strand: Reverse

Name: gvpA

Synonym: CYB_1833

Alternate gene names: 86609289

Gene position: 1923106-1922888 (Counterclockwise)

Preceding gene: 86609296

Following gene: 86609287

Centisome position: 63.12

GC content: 56.16

Gene sequence:

>219_bases
ATGGCAGTAGAGAAAGTGAACTCCTCGTCCAGCTTGGCCGAAGTGATCGATCGCATCTTGGACAAAGGTATCGTGGTCGA
TGCCTGGGTGCGGGTTTCTTTGGTTGGGATCGAGCTGTTGGCCATTGAAGCCCGCGTCGTTGTGGCTTCCGTGGAAACCT
ACCTGAAGTACGCTGAGGCTGTGGGTCTGACGGCTACTGCTGCTGCTCCTGCCGTCTAA

Upstream 100 bases:

>100_bases
TCCTCAGCTGGGATCCCTTCTACATGCCATTTTGCCGCCGAGTTGTCTGTCCTTTTCAACCCTCATCAGTATCAGCAGTA
TCAGTGCAGGAGAGATCGTT

Downstream 100 bases:

>100_bases
ATCTGCCTAACCAAAATCACTCAACCAAGGAAAGTGCCCACAACCCTCTCGCCTTGAGCATCGCAATGGTTGGATGAGTT
ATGCTCTCTGGGCGGAGGCG

Product: gas vesicle synthesis protein GvpA

Products: NA

Alternate protein names: GVP

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MAVEKVNSSSSLAEVIDRILDKGIVVDAWVRVSLVGIELLAIEARVVVASVETYLKYAEAVGLTATAAAPAV

Sequences:

>Translated_72_residues
MAVEKVNSSSSLAEVIDRILDKGIVVDAWVRVSLVGIELLAIEARVVVASVETYLKYAEAVGLTATAAAPAV
>Mature_71_residues
AVEKVNSSSSLAEVIDRILDKGIVVDAWVRVSLVGIELLAIEARVVVASVETYLKYAEAVGLTATAAAPAV

Specific function: Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the st

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle membrane

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gas vesicle protein type A family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GVPA_SYNJA (Q2JW39)

Other databases:

- EMBL:   CP000239
- RefSeq:   YP_474296.1
- STRING:   Q2JW39
- GeneID:   3898156
- GenomeReviews:   CP000239_GR
- KEGG:   cya:CYA_0829
- TIGR:   CYA_0829
- eggNOG:   NOG08756
- HOGENOM:   HBG695314
- OMA:   IDAWARV
- ProtClustDB:   PRK09371
- BioCyc:   SSP321327:CYA_0829-MONOMER
- GO:   GO:0005773
- HAMAP:   MF_00576
- InterPro:   IPR000638
- InterPro:   IPR018493

Pfam domain/function: PF00741 Gas_vesicle

EC number: NA

Molecular weight: Translated: 7513; Mature: 7382

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS00234 GAS_VESICLE_A_1; PS00669 GAS_VESICLE_A_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVEKVNSSSSLAEVIDRILDKGIVVDAWVRVSLVGIELLAIEARVVVASVETYLKYAEA
CCCCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLTATAAAPAV
CCCCCCCCCCCC
>Mature Secondary Structure 
AVEKVNSSSSLAEVIDRILDKGIVVDAWVRVSLVGIELLAIEARVVVASVETYLKYAEA
CCCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLTATAAAPAV
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA