Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

Click here to switch to the map view.

The map label for this gene is aroH [H]

Identifier: 86609295

GI number: 86609295

Start: 1926541

End: 1926915

Strand: Direct

Name: aroH [H]

Synonym: CYB_1839

Alternate gene names: 86609295

Gene position: 1926541-1926915 (Clockwise)

Preceding gene: 86609294

Following gene: 86609297

Centisome position: 63.23

GC content: 55.73

Gene sequence:

>375_bases
TTGGGGTGGCGAGTCAGAGCAATTCGGGGAGCCATCACCGTACCTACAAACAGTGCCGAGGCCATTGGCGCGGCGGTGGC
TGAGCTGCTGGATACGCTAGAGCACCGCAACGCCCTCGATCCAGCTGAACTAGTCAGCGTTATTTTTTCCGTTACTCCTG
ATTTAAATGCAGCTTTTCCCGCCCAGTTTGCTCGTCGTCGCCCCGGTTGGGAGTCGGTGCCTCTGTTGGATGTGCAACAG
ATGGAGGTGAGCGGCGACTTACCCCGTTGCATTCGGGTTTTGATCCAGTTGAATACTCCACTTGCTCAAGCGGACATGCA
GCATGTTTATCTGCGAGGTGCCCGCGAGTTAAGGCCAGATCTCAGCACTGTTTGA

Upstream 100 bases:

>100_bases
ATGGGGGCTGGTTTTCCCCAGAGGGATGGGATCCCAACAGGGATGAGTCTGTATAATTTTCTGGAAGCAAGGCGAGCTCA
AGCGCGCGAGGGTGTGGCCA

Downstream 100 bases:

>100_bases
TCGATCCATACAGCACCAGCACAGGGTTGACACTCTCACCGACTAAAGTCGGGGGATTTCTACACTGGAGGTGGGACAGT
CTGTTGCCATGGGCAACATG

Product: chorismate mutase

Products: NA

Alternate protein names: CM [H]

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MGWRVRAIRGAITVPTNSAEAIGAAVAELLDTLEHRNALDPAELVSVIFSVTPDLNAAFPAQFARRRPGWESVPLLDVQQ
MEVSGDLPRCIRVLIQLNTPLAQADMQHVYLRGARELRPDLSTV

Sequences:

>Translated_124_residues
MGWRVRAIRGAITVPTNSAEAIGAAVAELLDTLEHRNALDPAELVSVIFSVTPDLNAAFPAQFARRRPGWESVPLLDVQQ
MEVSGDLPRCIRVLIQLNTPLAQADMQHVYLRGARELRPDLSTV
>Mature_123_residues
GWRVRAIRGAITVPTNSAEAIGAAVAELLDTLEHRNALDPAELVSVIFSVTPDLNAAFPAQFARRRPGWESVPLLDVQQM
EVSGDLPRCIRVLIQLNTPLAQADMQHVYLRGARELRPDLSTV

Specific function: Unknown

COG id: COG4401

COG function: function code E; Chorismate mutase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 chorismate mutase aroH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008243
- InterPro:   IPR013813
- ProDom:   PD031888 [H]

Pfam domain/function: PF07736 CM_1 [H]

EC number: =5.4.99.5 [H]

Molecular weight: Translated: 13624; Mature: 13493

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGWRVRAIRGAITVPTNSAEAIGAAVAELLDTLEHRNALDPAELVSVIFSVTPDLNAAFP
CCCEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC
AQFARRRPGWESVPLLDVQQMEVSGDLPRCIRVLIQLNTPLAQADMQHVYLRGARELRPD
HHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
LSTV
CCCC
>Mature Secondary Structure 
GWRVRAIRGAITVPTNSAEAIGAAVAELLDTLEHRNALDPAELVSVIFSVTPDLNAAFP
CCEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC
AQFARRRPGWESVPLLDVQQMEVSGDLPRCIRVLIQLNTPLAQADMQHVYLRGARELRPD
HHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
LSTV
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2105742; 9384377; 8471608; 8378335; 8046752; 10818343 [H]