| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is aroH [H]
Identifier: 86609295
GI number: 86609295
Start: 1926541
End: 1926915
Strand: Direct
Name: aroH [H]
Synonym: CYB_1839
Alternate gene names: 86609295
Gene position: 1926541-1926915 (Clockwise)
Preceding gene: 86609294
Following gene: 86609297
Centisome position: 63.23
GC content: 55.73
Gene sequence:
>375_bases TTGGGGTGGCGAGTCAGAGCAATTCGGGGAGCCATCACCGTACCTACAAACAGTGCCGAGGCCATTGGCGCGGCGGTGGC TGAGCTGCTGGATACGCTAGAGCACCGCAACGCCCTCGATCCAGCTGAACTAGTCAGCGTTATTTTTTCCGTTACTCCTG ATTTAAATGCAGCTTTTCCCGCCCAGTTTGCTCGTCGTCGCCCCGGTTGGGAGTCGGTGCCTCTGTTGGATGTGCAACAG ATGGAGGTGAGCGGCGACTTACCCCGTTGCATTCGGGTTTTGATCCAGTTGAATACTCCACTTGCTCAAGCGGACATGCA GCATGTTTATCTGCGAGGTGCCCGCGAGTTAAGGCCAGATCTCAGCACTGTTTGA
Upstream 100 bases:
>100_bases ATGGGGGCTGGTTTTCCCCAGAGGGATGGGATCCCAACAGGGATGAGTCTGTATAATTTTCTGGAAGCAAGGCGAGCTCA AGCGCGCGAGGGTGTGGCCA
Downstream 100 bases:
>100_bases TCGATCCATACAGCACCAGCACAGGGTTGACACTCTCACCGACTAAAGTCGGGGGATTTCTACACTGGAGGTGGGACAGT CTGTTGCCATGGGCAACATG
Product: chorismate mutase
Products: NA
Alternate protein names: CM [H]
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MGWRVRAIRGAITVPTNSAEAIGAAVAELLDTLEHRNALDPAELVSVIFSVTPDLNAAFPAQFARRRPGWESVPLLDVQQ MEVSGDLPRCIRVLIQLNTPLAQADMQHVYLRGARELRPDLSTV
Sequences:
>Translated_124_residues MGWRVRAIRGAITVPTNSAEAIGAAVAELLDTLEHRNALDPAELVSVIFSVTPDLNAAFPAQFARRRPGWESVPLLDVQQ MEVSGDLPRCIRVLIQLNTPLAQADMQHVYLRGARELRPDLSTV >Mature_123_residues GWRVRAIRGAITVPTNSAEAIGAAVAELLDTLEHRNALDPAELVSVIFSVTPDLNAAFPAQFARRRPGWESVPLLDVQQM EVSGDLPRCIRVLIQLNTPLAQADMQHVYLRGARELRPDLSTV
Specific function: Unknown
COG id: COG4401
COG function: function code E; Chorismate mutase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 chorismate mutase aroH-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008243 - InterPro: IPR013813 - ProDom: PD031888 [H]
Pfam domain/function: PF07736 CM_1 [H]
EC number: =5.4.99.5 [H]
Molecular weight: Translated: 13624; Mature: 13493
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWRVRAIRGAITVPTNSAEAIGAAVAELLDTLEHRNALDPAELVSVIFSVTPDLNAAFP CCCEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC AQFARRRPGWESVPLLDVQQMEVSGDLPRCIRVLIQLNTPLAQADMQHVYLRGARELRPD HHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC LSTV CCCC >Mature Secondary Structure GWRVRAIRGAITVPTNSAEAIGAAVAELLDTLEHRNALDPAELVSVIFSVTPDLNAAFP CCEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC AQFARRRPGWESVPLLDVQQMEVSGDLPRCIRVLIQLNTPLAQADMQHVYLRGARELRPD HHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC LSTV CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2105742; 9384377; 8471608; 8378335; 8046752; 10818343 [H]