Click here to switch to the map view.

The map label for this gene is 86609294

Identifier: 86609294

GI number: 86609294

Start: 1925751

End: 1926437

Strand: Direct

Name: 86609294

Synonym: CYB_1838

Alternate gene names: NA

Gene position: 1925751-1926437 (Clockwise)

Preceding gene: 86609293

Following gene: 86609295

Centisome position: 63.21

GC content: 56.91

Gene sequence:

>687_bases
ATGACCGGCACTAGCTCTATCTCCAATGGCTCAGTCACCTTTGATCCCTACACGCCCGTTTTGGCCAACTACTACACACC
CAGCGCTTATCTGCGAAGCGATTTGGAATCGGGCTTACTGGAAAGTCGCCACGGTGAACGTCTCTTGGCCCTTCCAGAGG
CATTGCTGCGGGGCATCTACACGGGCCTGGAATACGAGACCGGCCAGGCTGCTCGTTTGGTGTTGCGCAACTGTGGTCGG
ATGTGGGGCAAGGAGTTTTTCCGCCGTTTTGCCCAAGAACTCTCCGACTACTACCAGAAGCCTTTGGCCGAGCTAGAGAT
GGGCACCTTTCTGCAAAGTCTGAGACAAGCCTGGAAAGCTCATGGCTGGGGATTGATCGAGATCGACTGGACTTACAAAG
ATCAAGGAGTGCTGGTGGTGTCGATTCGCAATTCCCCCTTCGCTGCTGTCACCCCTCCCCATTTCAAGCGTCCGATGGGC
TTTTTGGAGGCAGGGCTGTTGGCCACCTGGTTTAGCCAGCTAACCGGCCAGGATTTGCTCTGCGTGCAAACCGCCAGCGA
GGCTCTGGGAGCGAAGAGCAATTTGTTTGTCGTAACCGCTGCTGCCCGCCTCAAAGAGGGAGAAGCCTGGGTGGACTCCG
GCCTCAGCCACGAGCAGATCCTGGAAAAGCTCCTGCAGCCCAGCTAG

Upstream 100 bases:

>100_bases
CTCCCAGCTCAACAACCAACGAACTGTCAACTGCACCCTGCTCCTATTTGGATGCTTAAAGCTCAATAACGACTTGGATT
GGATAACCAGGGGATCCCTT

Downstream 100 bases:

>100_bases
GCGATGGGGGCTGGTTTTCCCCAGAGGGATGGGATCCCAACAGGGATGAGTCTGTATAATTTTCTGGAAGCAAGGCGAGC
TCAAGCGCGCGAGGGTGTGG

Product: V4R domain-containing protein

Products: NA

Alternate protein names: V4R Domain-Containing Protein; Bacteriochlorophyll 4-Vinyl Reductase

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MTGTSSISNGSVTFDPYTPVLANYYTPSAYLRSDLESGLLESRHGERLLALPEALLRGIYTGLEYETGQAARLVLRNCGR
MWGKEFFRRFAQELSDYYQKPLAELEMGTFLQSLRQAWKAHGWGLIEIDWTYKDQGVLVVSIRNSPFAAVTPPHFKRPMG
FLEAGLLATWFSQLTGQDLLCVQTASEALGAKSNLFVVTAAARLKEGEAWVDSGLSHEQILEKLLQPS

Sequences:

>Translated_228_residues
MTGTSSISNGSVTFDPYTPVLANYYTPSAYLRSDLESGLLESRHGERLLALPEALLRGIYTGLEYETGQAARLVLRNCGR
MWGKEFFRRFAQELSDYYQKPLAELEMGTFLQSLRQAWKAHGWGLIEIDWTYKDQGVLVVSIRNSPFAAVTPPHFKRPMG
FLEAGLLATWFSQLTGQDLLCVQTASEALGAKSNLFVVTAAARLKEGEAWVDSGLSHEQILEKLLQPS
>Mature_227_residues
TGTSSISNGSVTFDPYTPVLANYYTPSAYLRSDLESGLLESRHGERLLALPEALLRGIYTGLEYETGQAARLVLRNCGRM
WGKEFFRRFAQELSDYYQKPLAELEMGTFLQSLRQAWKAHGWGLIEIDWTYKDQGVLVVSIRNSPFAAVTPPHFKRPMGF
LEAGLLATWFSQLTGQDLLCVQTASEALGAKSNLFVVTAAARLKEGEAWVDSGLSHEQILEKLLQPS

Specific function: Unknown

COG id: COG1719

COG function: function code R; Predicted hydrocarbon binding protein (contains V4R domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25426; Mature: 25295

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTSSISNGSVTFDPYTPVLANYYTPSAYLRSDLESGLLESRHGERLLALPEALLRGIY
CCCCCCCCCCCEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
TGLEYETGQAARLVLRNCGRMWGKEFFRRFAQELSDYYQKPLAELEMGTFLQSLRQAWKA
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGWGLIEIDWTYKDQGVLVVSIRNSPFAAVTPPHFKRPMGFLEAGLLATWFSQLTGQDLL
CCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
CVQTASEALGAKSNLFVVTAAARLKEGEAWVDSGLSHEQILEKLLQPS
EHHHHHHHHCCCCCEEEEEEHHHHHCCHHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
TGTSSISNGSVTFDPYTPVLANYYTPSAYLRSDLESGLLESRHGERLLALPEALLRGIY
CCCCCCCCCCEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
TGLEYETGQAARLVLRNCGRMWGKEFFRRFAQELSDYYQKPLAELEMGTFLQSLRQAWKA
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGWGLIEIDWTYKDQGVLVVSIRNSPFAAVTPPHFKRPMGFLEAGLLATWFSQLTGQDLL
CCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
CVQTASEALGAKSNLFVVTAAARLKEGEAWVDSGLSHEQILEKLLQPS
EHHHHHHHHCCCCCEEEEEEHHHHHCCHHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA