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The map label for this gene is yedY [H]

Identifier: 86609283

GI number: 86609283

Start: 1918466

End: 1919422

Strand: Reverse

Name: yedY [H]

Synonym: CYB_1827

Alternate gene names: 86609283

Gene position: 1919422-1918466 (Counterclockwise)

Preceding gene: 86609284

Following gene: 86609277

Centisome position: 63.0

GC content: 56.64

Gene sequence:

>957_bases
ATGTTCGGGATCCGAGTTCCTCGCCCCTGGCAACGAGAGGCACAGGTCACTCCAGAAGAGATGTTTTTCAGCCGGCGGCA
ATTTCTAGCGCAACTGGGATCCGTTGGGGTGGGAGCCAGTTTTTCTATTTTTGGGTTTGGCAGCAGGGGATCCGCTCCCT
CGGTAGAACGAGAGCTGACGGGGATCCCACTCAACCCCCACTTTTCGGATGTGGGCAGGCCCGTCACCGAGGAGATTGTA
GCTACTCGTTACAACAACTTTTACGAGTTTGGCTCCGGCAAGCGCGTCTGGCGGGCTGCACAGGCTTTGCCCACGGATCC
CTGGACTGTCGAGATTACCGGGCTGGTGCGGCATCCTCAGCGGTTGGGCCTGGAAGATCTGTTTAACTTCCCCCTCGAAG
AGCGCATCTATCGCTTTCGCTGTGTGGAAGCCTGGGCGATGGTGGTGCCGTGGTTGGGCTTTCCGATGCGGCTGTTGCTG
GAACGGGTGGATCCTTTGCCGACGGCTCGATTTGTCCGCTTCACTTCCTTTTACGATCCGGAAATTATGCCTGGCCCAAT
CTGGCCCCCCAACTTGCCTTGGCCCTACACGGAAGGGTTGCGGATCGAGGAAATGGCTAACGAGTTGGCCTTTTTTGCCC
TCGGCGTTTATGGCAAGCCGTTGCCCAAACAGCACGGAGCGCCAATTCGCATGGTGGTTCCCTGGAAGTATGGCTTTAAA
GGGGGAAAATCCATCGTCAAAATCGAGTTTTTGGCCCGTCAACCCTCCACGTTTTGGAATACCCTCGCCCCTGAGGAGTA
TGGATTTGAGGCCAATGTGGATCCTAGGGTGCCCCACCCCCGCTGGTCACAGGAGCAGGAAGTCTTGATCGGTTTCGGAT
CCCGTTCCCAGTGGCAAATCGTTCCCACCTTGCCCTACAACGGGTACGGAGAGTATGTTGCCCACTTATATGGGTAA

Upstream 100 bases:

>100_bases
TGTCGGCTTAGATCCGTTTAGGATGTAGTAATTCATTTAGGATGTAGTAGTTCGGGCGGCAGACTTTTTCCCTGACTCTG
AATCAAAGGATGGCTGATGG

Downstream 100 bases:

>100_bases
ACTACCCGACCCTGACTGCTTCGCAGTACAGGGCGGGCTTTCGGTAGCCCTGCAGTTGGCAAGCCAACCACGAACCTCTA
GGCTGGTTTACGGCAGCCCC

Product: sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MFGIRVPRPWQREAQVTPEEMFFSRRQFLAQLGSVGVGASFSIFGFGSRGSAPSVERELTGIPLNPHFSDVGRPVTEEIV
ATRYNNFYEFGSGKRVWRAAQALPTDPWTVEITGLVRHPQRLGLEDLFNFPLEERIYRFRCVEAWAMVVPWLGFPMRLLL
ERVDPLPTARFVRFTSFYDPEIMPGPIWPPNLPWPYTEGLRIEEMANELAFFALGVYGKPLPKQHGAPIRMVVPWKYGFK
GGKSIVKIEFLARQPSTFWNTLAPEEYGFEANVDPRVPHPRWSQEQEVLIGFGSRSQWQIVPTLPYNGYGEYVAHLYG

Sequences:

>Translated_318_residues
MFGIRVPRPWQREAQVTPEEMFFSRRQFLAQLGSVGVGASFSIFGFGSRGSAPSVERELTGIPLNPHFSDVGRPVTEEIV
ATRYNNFYEFGSGKRVWRAAQALPTDPWTVEITGLVRHPQRLGLEDLFNFPLEERIYRFRCVEAWAMVVPWLGFPMRLLL
ERVDPLPTARFVRFTSFYDPEIMPGPIWPPNLPWPYTEGLRIEEMANELAFFALGVYGKPLPKQHGAPIRMVVPWKYGFK
GGKSIVKIEFLARQPSTFWNTLAPEEYGFEANVDPRVPHPRWSQEQEVLIGFGSRSQWQIVPTLPYNGYGEYVAHLYG
>Mature_318_residues
MFGIRVPRPWQREAQVTPEEMFFSRRQFLAQLGSVGVGASFSIFGFGSRGSAPSVERELTGIPLNPHFSDVGRPVTEEIV
ATRYNNFYEFGSGKRVWRAAQALPTDPWTVEITGLVRHPQRLGLEDLFNFPLEERIYRFRCVEAWAMVVPWLGFPMRLLL
ERVDPLPTARFVRFTSFYDPEIMPGPIWPPNLPWPYTEGLRIEEMANELAFFALGVYGKPLPKQHGAPIRMVVPWKYGFK
GGKSIVKIEFLARQPSTFWNTLAPEEYGFEANVDPRVPHPRWSQEQEVLIGFGSRSQWQIVPTLPYNGYGEYVAHLYG

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=322, Percent_Identity=47.2049689440994, Blast_Score=255, Evalue=3e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 36499; Mature: 36499

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGIRVPRPWQREAQVTPEEMFFSRRQFLAQLGSVGVGASFSIFGFGSRGSAPSVERELT
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHC
GIPLNPHFSDVGRPVTEEIVATRYNNFYEFGSGKRVWRAAQALPTDPWTVEITGLVRHPQ
CCCCCCCHHHHCCHHHHHHHHHHHCCCEECCCCHHHHHHHHCCCCCCCEEEEEEEECCHH
RLGLEDLFNFPLEERIYRFRCVEAWAMVVPWLGFPMRLLLERVDPLPTARFVRFTSFYDP
HCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHEEECCCCCC
EIMPGPIWPPNLPWPYTEGLRIEEMANELAFFALGVYGKPLPKQHGAPIRMVVPWKYGFK
CCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCC
GGKSIVKIEFLARQPSTFWNTLAPEEYGFEANVDPRVPHPRWSQEQEVLIGFGSRSQWQI
CCCEEEEEEEEECCCCHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEE
VPTLPYNGYGEYVAHLYG
EECCCCCCHHHHHHHHCC
>Mature Secondary Structure
MFGIRVPRPWQREAQVTPEEMFFSRRQFLAQLGSVGVGASFSIFGFGSRGSAPSVERELT
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHC
GIPLNPHFSDVGRPVTEEIVATRYNNFYEFGSGKRVWRAAQALPTDPWTVEITGLVRHPQ
CCCCCCCHHHHCCHHHHHHHHHHHCCCEECCCCHHHHHHHHCCCCCCCEEEEEEEECCHH
RLGLEDLFNFPLEERIYRFRCVEAWAMVVPWLGFPMRLLLERVDPLPTARFVRFTSFYDP
HCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHEEECCCCCC
EIMPGPIWPPNLPWPYTEGLRIEEMANELAFFALGVYGKPLPKQHGAPIRMVVPWKYGFK
CCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCC
GGKSIVKIEFLARQPSTFWNTLAPEEYGFEANVDPRVPHPRWSQEQEVLIGFGSRSQWQI
CCCEEEEEEEEECCCCHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEE
VPTLPYNGYGEYVAHLYG
EECCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA