| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609267
Identifier: 86609267
GI number: 86609267
Start: 1893620
End: 1894801
Strand: Reverse
Name: 86609267
Synonym: CYB_1810
Alternate gene names: NA
Gene position: 1894801-1893620 (Counterclockwise)
Preceding gene: 86609268
Following gene: 86609266
Centisome position: 62.19
GC content: 58.46
Gene sequence:
>1182_bases ATGACTGCCACTCTTGCTCCTGCTCCTTCCTGCTTCTTTCTGGCCGGCTTATCTCCTCTGGAGCAACTGCAACTGGCTCC TATTGTCCAGCGCCTAGAGGCAGGGGGAGCCCTTGTGCCGGATGCCCCTGCCAATCGCCTAGAGGTCATTGGCATCCTGC ATAGCTACGGCGAGGTGCTGGATGCCTATTCGCGCAATTTGATCTTTATTGCCGACCACCAATTTTTGGAGCTTTTTCCG GCGTTCAAGTATTTCAACGGCGAGATTACCCTGGGCAAATGGCTGCGCTACCTGTGGCATGACCGCATCAACTACGAGTT TGCCGAATACTGCATGAAGGCTATGCTCTGGCATGGGGGAGGGGGGCTAGACCGCTACCTGGATACCCCTGAATTTGTCG AGCGGGCCAAGAGAGCCATCCGGGCCAAAATCCGCTTCAATCCCTTCTTGCAGGGCTTGGGGATCTTGTTTCCCGACTTT GCTCTAGAACAGGTGCGCATGCTGGCTATGTACAGCGGCTTGGGCCAGTTTTGGCGGGTGATGAGCGATATTTTCCTGGC GCTGGCCAAGCGCTCTGAGACAGAACCCCACCTCACCATTCCCGACGTGGTGGCTCACATCCAGCAGGGGTTGGTGGCAG CTGCCGACAAGCCTATCACCTACGCTCCCTGCATCTGGGGCCGCCGCTACGAGATCATCCCTCTCTCGGCGGGTCTGACT TTCCTATCAGATACGGCTATTCCCTATGTGGAAGCGGTGTTTTTCCGCTCCTTTCCCTTTATGGGCACGGTTTCCTACAA CGCCCAGGCCCACCAGATCCCGGCTGAGCAGGCTGACTTTGCCTACGGCGCCCTCTACGCCGATCCGCTGCCGGTAGGCA GCGCTGGGATCCCGCCTACCCTGTTGATGCAGGATATGATGCGCCACCTGCCCCCCTACTTGCGAGAGCACTACCGCCGC CAGCCTCGCGGGGATGATGACCTGCGGGTGAAAATCTGCCTCAGCTTCCAAAAGGCCATGTTCTGTGTTACCACTGCCGC CCTGCGGGCTCTTGCCCCCTTCCCTCTGGAAACTCAGGATCCCCAGCAGCAGTTGGCCAACCGCAAGTTTCTGGCTCCTT GGCTGCAGCGCCTGCTGGGATCCCGTCTGTTAAAGGTGCAGGAAGAAAGGGTTGAGGCCTAG
Upstream 100 bases:
>100_bases GGCTAACCTAGCTGGTGTTGCAGGACTGGTCACTGCCTTTCAGTTTGGGTTGTCTTCCTTTTGATGATTTGATGAGATCG ACGGAGTTTCTTTTGCTCCC
Downstream 100 bases:
>100_bases CTGAGCTGGGAACTGCTACTTTTGGTTACTGGAAGGGGGATCCCCTTTTCGGATACAATATCTGCGCCCAGTTGAGCAAT GGGGTGGCGTAGCCAAGTGG
Product: CO2 hydration protein
Products: NA
Alternate protein names: CO2 Hydration Protein ChpX; CO2-Hydration Protein; Carbon Dioxide Hydration Protein; CO2 Hydration; High Affinity CO2 Uptake Protein; Low Affinity CO2 Uptake Protein; Uptake
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MTATLAPAPSCFFLAGLSPLEQLQLAPIVQRLEAGGALVPDAPANRLEVIGILHSYGEVLDAYSRNLIFIADHQFLELFP AFKYFNGEITLGKWLRYLWHDRINYEFAEYCMKAMLWHGGGGLDRYLDTPEFVERAKRAIRAKIRFNPFLQGLGILFPDF ALEQVRMLAMYSGLGQFWRVMSDIFLALAKRSETEPHLTIPDVVAHIQQGLVAAADKPITYAPCIWGRRYEIIPLSAGLT FLSDTAIPYVEAVFFRSFPFMGTVSYNAQAHQIPAEQADFAYGALYADPLPVGSAGIPPTLLMQDMMRHLPPYLREHYRR QPRGDDDLRVKICLSFQKAMFCVTTAALRALAPFPLETQDPQQQLANRKFLAPWLQRLLGSRLLKVQEERVEA
Sequences:
>Translated_393_residues MTATLAPAPSCFFLAGLSPLEQLQLAPIVQRLEAGGALVPDAPANRLEVIGILHSYGEVLDAYSRNLIFIADHQFLELFP AFKYFNGEITLGKWLRYLWHDRINYEFAEYCMKAMLWHGGGGLDRYLDTPEFVERAKRAIRAKIRFNPFLQGLGILFPDF ALEQVRMLAMYSGLGQFWRVMSDIFLALAKRSETEPHLTIPDVVAHIQQGLVAAADKPITYAPCIWGRRYEIIPLSAGLT FLSDTAIPYVEAVFFRSFPFMGTVSYNAQAHQIPAEQADFAYGALYADPLPVGSAGIPPTLLMQDMMRHLPPYLREHYRR QPRGDDDLRVKICLSFQKAMFCVTTAALRALAPFPLETQDPQQQLANRKFLAPWLQRLLGSRLLKVQEERVEA >Mature_392_residues TATLAPAPSCFFLAGLSPLEQLQLAPIVQRLEAGGALVPDAPANRLEVIGILHSYGEVLDAYSRNLIFIADHQFLELFPA FKYFNGEITLGKWLRYLWHDRINYEFAEYCMKAMLWHGGGGLDRYLDTPEFVERAKRAIRAKIRFNPFLQGLGILFPDFA LEQVRMLAMYSGLGQFWRVMSDIFLALAKRSETEPHLTIPDVVAHIQQGLVAAADKPITYAPCIWGRRYEIIPLSAGLTF LSDTAIPYVEAVFFRSFPFMGTVSYNAQAHQIPAEQADFAYGALYADPLPVGSAGIPPTLLMQDMMRHLPPYLREHYRRQ PRGDDDLRVKICLSFQKAMFCVTTAALRALAPFPLETQDPQQQLANRKFLAPWLQRLLGSRLLKVQEERVEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44469; Mature: 44338
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATLAPAPSCFFLAGLSPLEQLQLAPIVQRLEAGGALVPDAPANRLEVIGILHSYGEVL CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH DAYSRNLIFIADHQFLELFPAFKYFNGEITLGKWLRYLWHDRINYEFAEYCMKAMLWHGG HHHCCCEEEEECHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC GGLDRYLDTPEFVERAKRAIRAKIRFNPFLQGLGILFPDFALEQVRMLAMYSGLGQFWRV CCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH MSDIFLALAKRSETEPHLTIPDVVAHIQQGLVAAADKPITYAPCIWGRRYEIIPLSAGLT HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEEECCCCH FLSDTAIPYVEAVFFRSFPFMGTVSYNAQAHQIPAEQADFAYGALYADPLPVGSAGIPPT HHHCCCHHHHHHHHHHCCCCEEEEECCCHHHCCCCHHCCCHHHHEECCCCCCCCCCCCHH LLMQDMMRHLPPYLREHYRRQPRGDDDLRVKICLSFQKAMFCVTTAALRALAPFPLETQD HHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCC PQQQLANRKFLAPWLQRLLGSRLLKVQEERVEA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TATLAPAPSCFFLAGLSPLEQLQLAPIVQRLEAGGALVPDAPANRLEVIGILHSYGEVL CCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH DAYSRNLIFIADHQFLELFPAFKYFNGEITLGKWLRYLWHDRINYEFAEYCMKAMLWHGG HHHCCCEEEEECHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC GGLDRYLDTPEFVERAKRAIRAKIRFNPFLQGLGILFPDFALEQVRMLAMYSGLGQFWRV CCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH MSDIFLALAKRSETEPHLTIPDVVAHIQQGLVAAADKPITYAPCIWGRRYEIIPLSAGLT HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEEECCCCH FLSDTAIPYVEAVFFRSFPFMGTVSYNAQAHQIPAEQADFAYGALYADPLPVGSAGIPPT HHHCCCHHHHHHHHHHCCCCEEEEECCCHHHCCCCHHCCCHHHHEECCCCCCCCCCCCHH LLMQDMMRHLPPYLREHYRRQPRGDDDLRVKICLSFQKAMFCVTTAALRALAPFPLETQD HHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCC PQQQLANRKFLAPWLQRLLGSRLLKVQEERVEA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA