| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609257
Identifier: 86609257
GI number: 86609257
Start: 1886343
End: 1887170
Strand: Reverse
Name: 86609257
Synonym: CYB_1799
Alternate gene names: NA
Gene position: 1887170-1886343 (Counterclockwise)
Preceding gene: 86609258
Following gene: 86609256
Centisome position: 61.94
GC content: 61.47
Gene sequence:
>828_bases ATGGCACTCCTGGCTGCTCCCAACCGTGAACAAATCCTGCAGCGTAGGCAGCTTTTGCGTCGGCAACGGCGCAGCCGATT CTGGCAGGGATCCTGGCGCCTGACCGGTTCGATGACCCTCTTGGCGCTGCTGGTGCTGGGCCTACGGCAGCCCCACTGGC AAATTCGTCAGCCAGAACAGATTCAGGTAAAGGGTGCCCACTGGGTCGATCCCGCCTGGATACGGGCACAATTGCCCCTG CAGTATCCCCTCAACATTTGGCAGGTGCAACCGGCTGTTTTGGAAAGGGCTTTGCTGGGATCCCCGACCCGCCCCTCTCC CATCGAAAGCGTCCAGGTGCAGCGACGGCTGCTGCCGGTGGGGGTAATCGTCCAGGTGCGAGAACGGCAACCTGTTGCGC GGGCGCGATGGGGCGACCAGATGGGCTGGGTGGATGTCCAGGGCAACTGGCTGTCTCCGGATCCCTACCGTTCCCCCAAG TCTTGGCCTGATCTGGAGCTGCTGGGCTGGGAGAACCACACCCCAGACCAATGGGCGCTGTTGCTCAAGGCTTTGCAGCA ATCCGAAATCCAGATTAGGGCAGTGGATTGGCAATCTGGAGCGGGAATTACCCTGCATACTGAGCTGGGCAACGTCTACC TGGGGCCGATTTCCGACCGCTTGCCCTTGCAAATTCAGACCCTCAACCAAATGCGGGATCTGCGCCGCTACTGCGAGTGT ACGCCCGACGACATCGTCCAGATTGACCTCACCAGCCCCAGTGTGCCCACCTTGCAACTTACCCCCACGGCCACCCAGGA GCGCTGGAAAGACGTGCGGATGCCCTAG
Upstream 100 bases:
>100_bases GGTTTGGCTGCGGGCGGATCAGGTTCAGGAGATGGCGGGTTGAGTAGAAGCACGGAATGTTCCCCATCTGCATACCCCGT GATGGGGTGAAGGGGGATCC
Downstream 100 bases:
>100_bases CTTTGCTATGAACCCGGTGCCGGCGGTGGAGGTGAACCAATTGTGGACAGCTTATCCCGGTCATCCGCCGGTGCTGCAAG GGCTGGATCTACGGGTCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Polypeptide-Transport-Associated Domain Protein FtsQ-Type; POTRA Domain FtsQ-Type Family; Septal Protein; Polypeptide-Transport-Associated Domain-Containing Protein
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MALLAAPNREQILQRRQLLRRQRRSRFWQGSWRLTGSMTLLALLVLGLRQPHWQIRQPEQIQVKGAHWVDPAWIRAQLPL QYPLNIWQVQPAVLERALLGSPTRPSPIESVQVQRRLLPVGVIVQVRERQPVARARWGDQMGWVDVQGNWLSPDPYRSPK SWPDLELLGWENHTPDQWALLLKALQQSEIQIRAVDWQSGAGITLHTELGNVYLGPISDRLPLQIQTLNQMRDLRRYCEC TPDDIVQIDLTSPSVPTLQLTPTATQERWKDVRMP
Sequences:
>Translated_275_residues MALLAAPNREQILQRRQLLRRQRRSRFWQGSWRLTGSMTLLALLVLGLRQPHWQIRQPEQIQVKGAHWVDPAWIRAQLPL QYPLNIWQVQPAVLERALLGSPTRPSPIESVQVQRRLLPVGVIVQVRERQPVARARWGDQMGWVDVQGNWLSPDPYRSPK SWPDLELLGWENHTPDQWALLLKALQQSEIQIRAVDWQSGAGITLHTELGNVYLGPISDRLPLQIQTLNQMRDLRRYCEC TPDDIVQIDLTSPSVPTLQLTPTATQERWKDVRMP >Mature_274_residues ALLAAPNREQILQRRQLLRRQRRSRFWQGSWRLTGSMTLLALLVLGLRQPHWQIRQPEQIQVKGAHWVDPAWIRAQLPLQ YPLNIWQVQPAVLERALLGSPTRPSPIESVQVQRRLLPVGVIVQVRERQPVARARWGDQMGWVDVQGNWLSPDPYRSPKS WPDLELLGWENHTPDQWALLLKALQQSEIQIRAVDWQSGAGITLHTELGNVYLGPISDRLPLQIQTLNQMRDLRRYCECT PDDIVQIDLTSPSVPTLQLTPTATQERWKDVRMP
Specific function: Unknown
COG id: COG1589
COG function: function code M; Cell division septal protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31863; Mature: 31732
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLAAPNREQILQRRQLLRRQRRSRFWQGSWRLTGSMTLLALLVLGLRQPHWQIRQPEQ CCEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCE IQVKGAHWVDPAWIRAQLPLQYPLNIWQVQPAVLERALLGSPTRPSPIESVQVQRRLLPV EEEECCCCCCHHHEEEECCCCCCCCEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC GVIVQVRERQPVARARWGDQMGWVDVQGNWLSPDPYRSPKSWPDLELLGWENHTPDQWAL EEEEEECCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHH LLKALQQSEIQIRAVDWQSGAGITLHTELGNVYLGPISDRLPLQIQTLNQMRDLRRYCEC HHHHHHHCCEEEEEEEECCCCCEEEEEECCCEEECCCCCCCCEEHHHHHHHHHHHHHHCC TPDDIVQIDLTSPSVPTLQLTPTATQERWKDVRMP CCCCEEEEEECCCCCCEEEECCCCHHHHHHHCCCC >Mature Secondary Structure ALLAAPNREQILQRRQLLRRQRRSRFWQGSWRLTGSMTLLALLVLGLRQPHWQIRQPEQ CEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCE IQVKGAHWVDPAWIRAQLPLQYPLNIWQVQPAVLERALLGSPTRPSPIESVQVQRRLLPV EEEECCCCCCHHHEEEECCCCCCCCEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC GVIVQVRERQPVARARWGDQMGWVDVQGNWLSPDPYRSPKSWPDLELLGWENHTPDQWAL EEEEEECCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHH LLKALQQSEIQIRAVDWQSGAGITLHTELGNVYLGPISDRLPLQIQTLNQMRDLRRYCEC HHHHHHHCCEEEEEEEECCCCCEEEEEECCCEEECCCCCCCCEEHHHHHHHHHHHHHHCC TPDDIVQIDLTSPSVPTLQLTPTATQERWKDVRMP CCCCEEEEEECCCCCCEEEECCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA