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The map label for this gene is ndhO

Identifier: 86609258

GI number: 86609258

Start: 1887228

End: 1887446

Strand: Reverse

Name: ndhO

Synonym: CYB_1800

Alternate gene names: 86609258

Gene position: 1887446-1887228 (Counterclockwise)

Preceding gene: 86609259

Following gene: 86609257

Centisome position: 61.95

GC content: 55.25

Gene sequence:

>219_bases
ATGGCGATTAAGCGAGGCACCTTGGTGCGGGCTATCCGCGAGAAACTGGAGGGTAGCTTAGAAGCGCAGGCAAGCGATCC
TTTTATTCCCAACTACGTTTTCGAGACCCCCGGAGAAGTCGTGGATATCAAAGGTGACTACCTGCAGATTAAGTTTGGGG
CTGTTCCCACCCCTACGGTTTGGCTGCGGGCGGATCAGGTTCAGGAGATGGCGGGTTGA

Upstream 100 bases:

>100_bases
GAGCCAGAGGCTGGATCCCAGCTTTCTTCTTCACGGCAGCGGCAGGCGTGATACAACTGCTATCGAACCGGCTAATCTGC
GACTGAACTGAGGAGGAGCA

Downstream 100 bases:

>100_bases
GTAGAAGCACGGAATGTTCCCCATCTGCATACCCCGTGATGGGGTGAAGGGGGATCCATGGCACTCCTGGCTGCTCCCAA
CCGTGAACAAATCCTGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NAD(P)H dehydrogenase I subunit O; NDH-1 subunit O; NDH-O

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MAIKRGTLVRAIREKLEGSLEAQASDPFIPNYVFETPGEVVDIKGDYLQIKFGAVPTPTVWLRADQVQEMAG

Sequences:

>Translated_72_residues
MAIKRGTLVRAIREKLEGSLEAQASDPFIPNYVFETPGEVVDIKGDYLQIKFGAVPTPTVWLRADQVQEMAG
>Mature_71_residues
AIKRGTLVRAIREKLEGSLEAQASDPFIPNYVFETPGEVVDIKGDYLQIKFGAVPTPTVWLRADQVQEMAG

Specific function: NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I ndhO subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NDHO_SYNJB (Q2JHE4)

Other databases:

- EMBL:   CP000240
- RefSeq:   YP_478020.1
- STRING:   Q2JHE4
- GeneID:   3901148
- GenomeReviews:   CP000240_GR
- KEGG:   cyb:CYB_1800
- TIGR:   CYB_1800
- eggNOG:   NOG14679
- HOGENOM:   HBG284750
- OMA:   RPVPDVW
- ProtClustDB:   CLSK893551
- BioCyc:   SSP321332:CYB_1800-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_01354
- InterPro:   IPR020905

Pfam domain/function: PF11910 NdhO

EC number: NA

Molecular weight: Translated: 7963; Mature: 7832

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIKRGTLVRAIREKLEGSLEAQASDPFIPNYVFETPGEVVDIKGDYLQIKFGAVPTPTV
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEECCCEEEEEECCCCCCEE
WLRADQVQEMAG
EEEHHHHHHHCC
>Mature Secondary Structure 
AIKRGTLVRAIREKLEGSLEAQASDPFIPNYVFETPGEVVDIKGDYLQIKFGAVPTPTV
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEECCCEEEEEECCCCCCEE
WLRADQVQEMAG
EEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA