| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609251
Identifier: 86609251
GI number: 86609251
Start: 1881001
End: 1881660
Strand: Reverse
Name: 86609251
Synonym: CYB_1793
Alternate gene names: NA
Gene position: 1881660-1881001 (Counterclockwise)
Preceding gene: 86609252
Following gene: 86609250
Centisome position: 61.76
GC content: 62.12
Gene sequence:
>660_bases ATGACGCTCCGCGCCTTGCCTGGCCAGAACGACGAAACTCGCTATTTTGTCAGTGGTGAGGTACAGGTGGAAGCCGGGGC GGGGATTGGGGCAGGGGTGCTGCTGCGGGCCAACCCCGGCTGTCGAATTCACATCGGGCGCGGCGCGTGTATCGGCATGG GATCCGTTCTGCACGCCTGTGGGGGATCCCTCATCGTGGAGGCGGGAGCAACCTTGGGAATGGGGGTGCTGGTGATCGGG CAGGGCACCATCGGCAAAAACGCCTGCATCGGCTCAGAAACCACAGTGCTGAATTGTTCGGTGCTCAGCCAAGCAGTCAT TCCCCCCGGCTCGCTGATCGGGGATCCCACCTATGGTTTCGATCTCCAGGAGGCGGGCGGCAGCAAGCCCATCCCGGCAG AGCCCTCGCCGGCGGCAGTGGAAATGGCTCCAGAGATGTCGCCTGAGCCGTCTCCCCCACCCAGTTCTCCGGTGGCCAAT GTTGAAAAGCAAACCCGCCGCTGGCAGGAAGCTGCCGAGCAAACCCAAGAAAAGTCCGGTTCCCCAAGGACCAAAACGCG CAACCTCAACGGGATCCCTGGCCATTGGGAATTGGATCGCCTCTTGAGCAAGATTTATCCCCATCGACAGGTGCTCTCCT CTGGGGATAGCCGGCTCTGA
Upstream 100 bases:
>100_bases AACCCCTTGAGGGATCCCAGCTTTTTTTGACCTCTGTTGGTTCAAGCCCAACCCCCCAGCGATGAGGAGCACTTTGTTGG CCTCTACTTTGCCCAACTCC
Downstream 100 bases:
>100_bases TGGCTAAACTGGCGTGAGTAGTTAGGATGCCGATGTCAACCTCCCTGGGCCTGATTCAGACGCGCAGCTTTCCGGTCATC GTGCGCATTGCTGACGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: ORF I [H]
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MTLRALPGQNDETRYFVSGEVQVEAGAGIGAGVLLRANPGCRIHIGRGACIGMGSVLHACGGSLIVEAGATLGMGVLVIG QGTIGKNACIGSETTVLNCSVLSQAVIPPGSLIGDPTYGFDLQEAGGSKPIPAEPSPAAVEMAPEMSPEPSPPPSSPVAN VEKQTRRWQEAAEQTQEKSGSPRTKTRNLNGIPGHWELDRLLSKIYPHRQVLSSGDSRL
Sequences:
>Translated_219_residues MTLRALPGQNDETRYFVSGEVQVEAGAGIGAGVLLRANPGCRIHIGRGACIGMGSVLHACGGSLIVEAGATLGMGVLVIG QGTIGKNACIGSETTVLNCSVLSQAVIPPGSLIGDPTYGFDLQEAGGSKPIPAEPSPAAVEMAPEMSPEPSPPPSSPVAN VEKQTRRWQEAAEQTQEKSGSPRTKTRNLNGIPGHWELDRLLSKIYPHRQVLSSGDSRL >Mature_218_residues TLRALPGQNDETRYFVSGEVQVEAGAGIGAGVLLRANPGCRIHIGRGACIGMGSVLHACGGSLIVEAGATLGMGVLVIGQ GTIGKNACIGSETTVLNCSVLSQAVIPPGSLIGDPTYGFDLQEAGGSKPIPAEPSPAAVEMAPEMSPEPSPPPSSPVANV EKQTRRWQEAAEQTQEKSGSPRTKTRNLNGIPGHWELDRLLSKIYPHRQVLSSGDSRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22742; Mature: 22611
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRALPGQNDETRYFVSGEVQVEAGAGIGAGVLLRANPGCRIHIGRGACIGMGSVLHAC CCCCCCCCCCCCEEEEEECEEEEECCCCCCCEEEEECCCCCEEEECCCCEECHHHHHHHC GGSLIVEAGATLGMGVLVIGQGTIGKNACIGSETTVLNCSVLSQAVIPPGSLIGDPTYGF CCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHCCCCCCCCCCCCCCC DLQEAGGSKPIPAEPSPAAVEMAPEMSPEPSPPPSSPVANVEKQTRRWQEAAEQTQEKSG CHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC SPRTKTRNLNGIPGHWELDRLLSKIYPHRQVLSSGDSRL CCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHCCCCCCC >Mature Secondary Structure TLRALPGQNDETRYFVSGEVQVEAGAGIGAGVLLRANPGCRIHIGRGACIGMGSVLHAC CCCCCCCCCCCEEEEEECEEEEECCCCCCCEEEEECCCCCEEEECCCCEECHHHHHHHC GGSLIVEAGATLGMGVLVIGQGTIGKNACIGSETTVLNCSVLSQAVIPPGSLIGDPTYGF CCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHCCCCCCCCCCCCCCC DLQEAGGSKPIPAEPSPAAVEMAPEMSPEPSPPPSSPVANVEKQTRRWQEAAEQTQEKSG CHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC SPRTKTRNLNGIPGHWELDRLLSKIYPHRQVLSSGDSRL CCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2509426 [H]