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The map label for this gene is ccmM [H]

Identifier: 86609252

GI number: 86609252

Start: 1881751

End: 1883712

Strand: Reverse

Name: ccmM [H]

Synonym: CYB_1794

Alternate gene names: 86609252

Gene position: 1883712-1881751 (Counterclockwise)

Preceding gene: 86609253

Following gene: 86609251

Centisome position: 61.83

GC content: 62.23

Gene sequence:

>1962_bases
ATGCCTGCTCACACCTATGCTGCACCGCCAACGCCCTGGTCTCGCCGACTGGCGGAGCCTAAGATCGATCCCACAGCCTA
CGTGCATTCTTTCTCCAACCTCATTGGGGATGTGCGGGTGGAAGCGGAGGTGCTGATCGCCCCGGGAACTTCCATTCGCG
CTGACGAGGGATCCCCCTTCCACATTGGCGCCAGATCCAACATTCAGGATGGGGTGGTCATCCACGGCCTGGAACAGGGG
CGGGTGATAGGAGAAGACGGCCAACCCTACTCCGTTTGGATTGGCAGAAACACTTCCATTGCCCACATGGCTCTGATCCA
CGGGCCGGCCTACGTGGGCAACGACTGCTTTATTGGCTTCCGCTCGACGGTGTTCAACGCTCGGGTTGGGGATGGCTGCA
TCATCATGTTGCATTGCCTGATCCAGGATGTGGAGATCCCCCCAGGCAAGTACGTGCCTTCTGGATCCATCATCACCACC
CAGGCCGAGGCCGACCGGCTGCCCGACGTCCAGGATAGCGATGCCAAGTTTGCCCAACACGTGATCGGCATCAACCAAGC
CCTGCGAGAGGGCTACCAGTGCAGCGAAAACCTCGTCTGTATCGCTCCCATCCGCAACGAACTGCAGCGCACCTCTAACT
CAACGGCTACGGAGACGGCACCCATGACTCATTCTTCCCATCGCGGCAATGGCCGGAACGGCGGCGGATCCCCTCTCAAG
CCGGAGGTGGTGGAGCAAATTCGTGCCCTGTTGGCCCAAGGCTATCGCGTGGGGCTAGAGTATGCCGATGCTCGCCGCTT
CAAAACCTCTTCCTGGCAAAGCGAAAGCCCAATCACCAGCACCCACGAGGCGGAGGTGGTGCAGTCATTGGGGGCCATCC
TGGCAGAACACCAAGGGGAATATGTGCGCCTGCTGGGGATCGATCCCAAGGCTAAACGGCGGGTGCTGGAGCAAATCATC
CAAACCCCCGATGGGCCGGCGCTGGTTTCTGGGATGCCCAGCCGCGTCTCGGCAGCCGCTGCTCCGGGTTCTGGGGCGGT
CGGCTCTCGCTCTGGCTCAGGGCTGGAGGAGGAGATCCGGACTTTGTTGGCGCAGGGGTATCGCATTGGCCTGGAGGTGG
CCGATGCCCGCCGCTACCGCACCTCTTCTTGGCAGACCTTGGGCAATTTGAGCGGTCAGCCGCAGGAGATCCTGGCCGCT
GTTCAGGCTGCCCTAGCAGAGCACCAGGGAGAATATGTGCGCCTGTTGGGGATCGATCCCAAAGGCAAGCGGCGGGTGCT
GGAGAAGGTCATTCAAACCCCGCAAGGCCAGGTGAGCAGCAGTCCTGCAGGAACCGGCGTGGTGGCAGATACGGCTCCTG
CGGCAGGGGGCAGTGCCGGCCTGGATCTGGAGGTGCAGGAGGAGGTGCATCGGCTGCTGGCCCAAGGCTACCGCATTGGC
TACGAGTATGCCGACGAGCGCCGCTTCAAAACCTCTTCCTGGCAGAGTGGGCCGGCCATTCGCGCCACCCGCGGGCCAGA
GGTGTTGGCTAAGCTGACGGCTGCCCTGGCGGAGCACCAGGGAGAGTATGTACGCCTGCTGGGGATCGATCCCAAAGGCA
AACGGCGGGTCTATGAGCGCATCATCCAAACCCCTAGCGGAAAATCTGCTGCTGCTGCCGCGGCTCCTGCTTCTGCCCCC
AAGGGATCCCTTTCTGGCACCCGCCTCAGCGCCGAGGTGGTGGCTCAGGTGCAGCAGTTGCTCAGCCAAGGCTACCGCAT
CGGCACCGAACATGCGGACAAGCGCCGTTTTCGCACGTCTTCCTGGCAAAGCTGTAGCCCCATCGAGGCCACCCAAGTGC
CGCAAGTGGTGGCGGCTCTAGAAGCCTGCCTGGCGGAACACCAGGGAGAATACGTTCGCCTGCTGGGGATCGATCCCAAG
GCCAAACGGCGAGTGCTGGAGCAAATCATCCAAACCCCTTGA

Upstream 100 bases:

>100_bases
CTCTCTACAACAAGCGCGATCAACGCTAGCTGGGATCCCTTCCCTTCTCATCTCTCTTGCTGCCCTTGTCCGCCCTACTG
CGTTCTAGAGGCTCACGGTT

Downstream 100 bases:

>100_bases
GGGATCCCAGCTTTTTTTGACCTCTGTTGGTTCAAGCCCAACCCCCCAGCGATGAGGAGCACTTTGTTGGCCTCTACTTT
GCCCAACTCCATGACGCTCC

Product: carbon dioxide concentrating mechanism protein CcmM

Products: cofactor [C]

Alternate protein names: NA

Number of amino acids: Translated: 653; Mature: 652

Protein sequence:

>653_residues
MPAHTYAAPPTPWSRRLAEPKIDPTAYVHSFSNLIGDVRVEAEVLIAPGTSIRADEGSPFHIGARSNIQDGVVIHGLEQG
RVIGEDGQPYSVWIGRNTSIAHMALIHGPAYVGNDCFIGFRSTVFNARVGDGCIIMLHCLIQDVEIPPGKYVPSGSIITT
QAEADRLPDVQDSDAKFAQHVIGINQALREGYQCSENLVCIAPIRNELQRTSNSTATETAPMTHSSHRGNGRNGGGSPLK
PEVVEQIRALLAQGYRVGLEYADARRFKTSSWQSESPITSTHEAEVVQSLGAILAEHQGEYVRLLGIDPKAKRRVLEQII
QTPDGPALVSGMPSRVSAAAAPGSGAVGSRSGSGLEEEIRTLLAQGYRIGLEVADARRYRTSSWQTLGNLSGQPQEILAA
VQAALAEHQGEYVRLLGIDPKGKRRVLEKVIQTPQGQVSSSPAGTGVVADTAPAAGGSAGLDLEVQEEVHRLLAQGYRIG
YEYADERRFKTSSWQSGPAIRATRGPEVLAKLTAALAEHQGEYVRLLGIDPKGKRRVYERIIQTPSGKSAAAAAAPASAP
KGSLSGTRLSAEVVAQVQQLLSQGYRIGTEHADKRRFRTSSWQSCSPIEATQVPQVVAALEACLAEHQGEYVRLLGIDPK
AKRRVLEQIIQTP

Sequences:

>Translated_653_residues
MPAHTYAAPPTPWSRRLAEPKIDPTAYVHSFSNLIGDVRVEAEVLIAPGTSIRADEGSPFHIGARSNIQDGVVIHGLEQG
RVIGEDGQPYSVWIGRNTSIAHMALIHGPAYVGNDCFIGFRSTVFNARVGDGCIIMLHCLIQDVEIPPGKYVPSGSIITT
QAEADRLPDVQDSDAKFAQHVIGINQALREGYQCSENLVCIAPIRNELQRTSNSTATETAPMTHSSHRGNGRNGGGSPLK
PEVVEQIRALLAQGYRVGLEYADARRFKTSSWQSESPITSTHEAEVVQSLGAILAEHQGEYVRLLGIDPKAKRRVLEQII
QTPDGPALVSGMPSRVSAAAAPGSGAVGSRSGSGLEEEIRTLLAQGYRIGLEVADARRYRTSSWQTLGNLSGQPQEILAA
VQAALAEHQGEYVRLLGIDPKGKRRVLEKVIQTPQGQVSSSPAGTGVVADTAPAAGGSAGLDLEVQEEVHRLLAQGYRIG
YEYADERRFKTSSWQSGPAIRATRGPEVLAKLTAALAEHQGEYVRLLGIDPKGKRRVYERIIQTPSGKSAAAAAAPASAP
KGSLSGTRLSAEVVAQVQQLLSQGYRIGTEHADKRRFRTSSWQSCSPIEATQVPQVVAALEACLAEHQGEYVRLLGIDPK
AKRRVLEQIIQTP
>Mature_652_residues
PAHTYAAPPTPWSRRLAEPKIDPTAYVHSFSNLIGDVRVEAEVLIAPGTSIRADEGSPFHIGARSNIQDGVVIHGLEQGR
VIGEDGQPYSVWIGRNTSIAHMALIHGPAYVGNDCFIGFRSTVFNARVGDGCIIMLHCLIQDVEIPPGKYVPSGSIITTQ
AEADRLPDVQDSDAKFAQHVIGINQALREGYQCSENLVCIAPIRNELQRTSNSTATETAPMTHSSHRGNGRNGGGSPLKP
EVVEQIRALLAQGYRVGLEYADARRFKTSSWQSESPITSTHEAEVVQSLGAILAEHQGEYVRLLGIDPKAKRRVLEQIIQ
TPDGPALVSGMPSRVSAAAAPGSGAVGSRSGSGLEEEIRTLLAQGYRIGLEVADARRYRTSSWQTLGNLSGQPQEILAAV
QAALAEHQGEYVRLLGIDPKGKRRVLEKVIQTPQGQVSSSPAGTGVVADTAPAAGGSAGLDLEVQEEVHRLLAQGYRIGY
EYADERRFKTSSWQSGPAIRATRGPEVLAKLTAALAEHQGEYVRLLGIDPKGKRRVYERIIQTPSGKSAAAAAAPASAPK
GSLSGTRLSAEVVAQVQQLLSQGYRIGTEHADKRRFRTSSWQSCSPIEATQVPQVVAALEACLAEHQGEYVRLLGIDPKA
KRRVLEQIIQTP

Specific function: The presence of two potential DNA-binding regions suggests this protein may be a transcriptional regulator [H]

COG id: COG4451

COG function: function code C; Ribulose bisphosphate carboxylase small subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87081681, Length=110, Percent_Identity=37.2727272727273, Blast_Score=67, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017156
- InterPro:   IPR000894
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00101 RuBisCO_small [H]

EC number: NA

Molecular weight: Translated: 70183; Mature: 70052

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAHTYAAPPTPWSRRLAEPKIDPTAYVHSFSNLIGDVRVEAEVLIAPGTSIRADEGSPF
CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCEEEEEEEEEECCCCEECCCCCCE
HIGARSNIQDGVVIHGLEQGRVIGEDGQPYSVWIGRNTSIAHMALIHGPAYVGNDCFIGF
EECCCCCCCCCEEEEECCCCCEECCCCCEEEEEEECCCCEEEEEEEECCCEECCCEEEEE
RSTVFNARVGDGCIIMLHCLIQDVEIPPGKYVPSGSIITTQAEADRLPDVQDSDAKFAQH
HHHHEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHCCCCCCCCHHHHHHH
VIGINQALREGYQCSENLVCIAPIRNELQRTSNSTATETAPMTHSSHRGNGRNGGGSPLK
HHHHHHHHHCCCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PEVVEQIRALLAQGYRVGLEYADARRFKTSSWQSESPITSTHEAEVVQSLGAILAEHQGE
HHHHHHHHHHHHCCHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
YVRLLGIDPKAKRRVLEQIIQTPDGPALVSGMPSRVSAAAAPGSGAVGSRSGSGLEEEIR
EEEEEECCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHH
TLLAQGYRIGLEVADARRYRTSSWQTLGNLSGQPQEILAAVQAALAEHQGEYVRLLGIDP
HHHHCCCEEEEEEHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC
KGKRRVLEKVIQTPQGQVSSSPAGTGVVADTAPAAGGSAGLDLEVQEEVHRLLAQGYRIG
CHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHCC
YEYADERRFKTSSWQSGPAIRATRGPEVLAKLTAALAEHQGEYVRLLGIDPKGKRRVYER
CHHHHCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH
IIQTPSGKSAAAAAAPASAPKGSLSGTRLSAEVVAQVQQLLSQGYRIGTEHADKRRFRTS
HHCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC
SWQSCSPIEATQVPQVVAALEACLAEHQGEYVRLLGIDPKAKRRVLEQIIQTP
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PAHTYAAPPTPWSRRLAEPKIDPTAYVHSFSNLIGDVRVEAEVLIAPGTSIRADEGSPF
CCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCEEEEEEEEEECCCCEECCCCCCE
HIGARSNIQDGVVIHGLEQGRVIGEDGQPYSVWIGRNTSIAHMALIHGPAYVGNDCFIGF
EECCCCCCCCCEEEEECCCCCEECCCCCEEEEEEECCCCEEEEEEEECCCEECCCEEEEE
RSTVFNARVGDGCIIMLHCLIQDVEIPPGKYVPSGSIITTQAEADRLPDVQDSDAKFAQH
HHHHEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHCCCCCCCCHHHHHHH
VIGINQALREGYQCSENLVCIAPIRNELQRTSNSTATETAPMTHSSHRGNGRNGGGSPLK
HHHHHHHHHCCCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PEVVEQIRALLAQGYRVGLEYADARRFKTSSWQSESPITSTHEAEVVQSLGAILAEHQGE
HHHHHHHHHHHHCCHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
YVRLLGIDPKAKRRVLEQIIQTPDGPALVSGMPSRVSAAAAPGSGAVGSRSGSGLEEEIR
EEEEEECCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHH
TLLAQGYRIGLEVADARRYRTSSWQTLGNLSGQPQEILAAVQAALAEHQGEYVRLLGIDP
HHHHCCCEEEEEEHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC
KGKRRVLEKVIQTPQGQVSSSPAGTGVVADTAPAAGGSAGLDLEVQEEVHRLLAQGYRIG
CHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHCC
YEYADERRFKTSSWQSGPAIRATRGPEVLAKLTAALAEHQGEYVRLLGIDPKGKRRVYER
CHHHHCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH
IIQTPSGKSAAAAAAPASAPKGSLSGTRLSAEVVAQVQQLLSQGYRIGTEHADKRRFRTS
HHCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC
SWQSCSPIEATQVPQVVAALEACLAEHQGEYVRLLGIDPKAKRRVLEQIIQTP
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: pre-cofactor [C]

Specific reaction: pre-cofactor = cofactor [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8491708 [H]