| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is eutM [C]
Identifier: 86609250
GI number: 86609250
Start: 1880252
End: 1880968
Strand: Reverse
Name: eutM [C]
Synonym: CYB_1792
Alternate gene names: 86609250
Gene position: 1880968-1880252 (Counterclockwise)
Preceding gene: 86609251
Following gene: 86609249
Centisome position: 61.74
GC content: 59.83
Gene sequence:
>717_bases ATGTCAACCTCCCTGGGCCTGATTCAGACGCGCAGCTTTCCGGTCATCGTGCGCATTGCTGACGCCATGACCAAGTCGGC AGGCGTGACGCTGATCGGCTTTGAGAAAACCTCGGGGGGCTATTGCACAGCCATTGTGCGGGGGGGAATTGCCGATGTGC GCATTGCCATTGAGGAGGGAATTGAGCTGGCCCGCCAGTTTGACCAAGAGGAGATCTCCAGTTTGGTGATCCCGCGCCCC CTGCCCAACTTGGAAGTGGTACTGCCGATCAGCAGCAAGCTGTCTCAACTGGCACAAAACCGCGGCTACAGCCGCCTCAG TAACTTGGCCGTGGGCCTGCTGGAAACTCGCGGCTTCCCGGCAATGGTAGGAGCTGCCGATGTCATGCTCAAAACCGCGG ATGTCCAACTGGCGGCCTACGAGACCATTGGGGATGGCCTATGTACGGCCATTATCCGCGGTACGGTAGCCAACGTGGCC ATTGCCATCGATGCCGGCATGTACGAAGCAGAGCGCATTGGGGAACTGCACGCGGTGGCGGTGATCCCGCGCCCTCTGGA TGAGCTGGAGCAAGCCCTGCCGGTGGCCAGTTGTTTTGTTGCCCAGCCAGTGACCTTGCCGGTGACCCTTCCTCAAGTTC AGGAACAGGAAGTGCAGCGCAACGATACGGCTGTGGAACGGATCCCTGTTTATCTGGAGCCGCCTGAAACTCCCTAG
Upstream 100 bases:
>100_bases TGGATCGCCTCTTGAGCAAGATTTATCCCCATCGACAGGTGCTCTCCTCTGGGGATAGCCGGCTCTGATGGCTAAACTGG CGTGAGTAGTTAGGATGCCG
Downstream 100 bases:
>100_bases CCCCCTGAGCAATCCATCTGTTGCCCAAGAAAGCCGAGCAGGGCAGAACGGAAAAATGCTAGGCTACTGAAAGACCTGGG TCCGTGCAGCTCCGACGCCC
Product: microcompartments family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MSTSLGLIQTRSFPVIVRIADAMTKSAGVTLIGFEKTSGGYCTAIVRGGIADVRIAIEEGIELARQFDQEEISSLVIPRP LPNLEVVLPISSKLSQLAQNRGYSRLSNLAVGLLETRGFPAMVGAADVMLKTADVQLAAYETIGDGLCTAIIRGTVANVA IAIDAGMYEAERIGELHAVAVIPRPLDELEQALPVASCFVAQPVTLPVTLPQVQEQEVQRNDTAVERIPVYLEPPETP
Sequences:
>Translated_238_residues MSTSLGLIQTRSFPVIVRIADAMTKSAGVTLIGFEKTSGGYCTAIVRGGIADVRIAIEEGIELARQFDQEEISSLVIPRP LPNLEVVLPISSKLSQLAQNRGYSRLSNLAVGLLETRGFPAMVGAADVMLKTADVQLAAYETIGDGLCTAIIRGTVANVA IAIDAGMYEAERIGELHAVAVIPRPLDELEQALPVASCFVAQPVTLPVTLPQVQEQEVQRNDTAVERIPVYLEPPETP >Mature_237_residues STSLGLIQTRSFPVIVRIADAMTKSAGVTLIGFEKTSGGYCTAIVRGGIADVRIAIEEGIELARQFDQEEISSLVIPRPL PNLEVVLPISSKLSQLAQNRGYSRLSNLAVGLLETRGFPAMVGAADVMLKTADVQLAAYETIGDGLCTAIIRGTVANVAI AIDAGMYEAERIGELHAVAVIPRPLDELEQALPVASCFVAQPVTLPVTLPQVQEQEVQRNDTAVERIPVYLEPPETP
Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]
COG id: COG4577
COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial microcompartments protein family [H]
Homologues:
Organism=Escherichia coli, GI87082108, Length=87, Percent_Identity=50.5747126436782, Blast_Score=79, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020808 - InterPro: IPR000249 [H]
Pfam domain/function: PF00936 BMC [H]
EC number: NA
Molecular weight: Translated: 25419; Mature: 25288
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSLGLIQTRSFPVIVRIADAMTKSAGVTLIGFEKTSGGYCTAIVRGGIADVRIAIEEG CCCCCCEEEECCCCEEEEEHHHHHHCCCEEEEEEEECCCCEEEEEECCCCHHEEHHHHHH IELARQFDQEEISSLVIPRPLPNLEVVLPISSKLSQLAQNRGYSRLSNLAVGLLETRGFP HHHHHHCCHHHHHHEECCCCCCCCEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC AMVGAADVMLKTADVQLAAYETIGDGLCTAIIRGTVANVAIAIDAGMYEAERIGELHAVA HHHHHHHHEEEECCEEEEEHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHCCCEEEEE VIPRPLDELEQALPVASCFVAQPVTLPVTLPQVQEQEVQRNDTAVERIPVYLEPPETP ECCCCHHHHHHHCCHHHHHHCCCEEEEEECCCHHHHHHHHCCCHHHHCCEEECCCCCC >Mature Secondary Structure STSLGLIQTRSFPVIVRIADAMTKSAGVTLIGFEKTSGGYCTAIVRGGIADVRIAIEEG CCCCCEEEECCCCEEEEEHHHHHHCCCEEEEEEEECCCCEEEEEECCCCHHEEHHHHHH IELARQFDQEEISSLVIPRPLPNLEVVLPISSKLSQLAQNRGYSRLSNLAVGLLETRGFP HHHHHHCCHHHHHHEECCCCCCCCEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC AMVGAADVMLKTADVQLAAYETIGDGLCTAIIRGTVANVAIAIDAGMYEAERIGELHAVA HHHHHHHHEEEECCEEEEEHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHCCCEEEEE VIPRPLDELEQALPVASCFVAQPVTLPVTLPQVQEQEVQRNDTAVERIPVYLEPPETP ECCCCHHHHHHHCCHHHHHHCCCEEEEEECCCHHHHHHHHCCCHHHHCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]